Query= MSMg01no356_m15.b1 MSMg01no356_m15.b1 CHROMAT_FILE:
MSMg01no356_m15.b1 PHD_FILE: MSMg01no356_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:37 2005
(475 letters)
>mm_chr1_188107514_188108388
Length = 875
Score = 851 bits (440), Expect = 0.0
Identities = 464/472 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaaatgactatcgtcctctgttgtggagctagggatcaaacctaggactgcgca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaatgactatcgtcctctgttgtggagctagggatcaaacctaggactgcgca 263
Query: 64 catgctaggcaagcacttagccctggttgcctctagaaaaatggattttagtcattttag 123
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 264 catgctaggcaagcacttagccctggttgcctttaggaaaatggattttagtcattttag 323
Query: 124 tgggaaataagaatacatttggaggcacgaaggtggttttgcatagcttgtattcactga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgggaaataagaatacatttggaggcacgaaggtggttttgcatagcttgtattcactga 383
Query: 184 atcacgtgtttacttttgctttaatgtctcatgctcattaaataatatgccccacaagac 243
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 384 atcacgtgtttacttttgctttaatatctcatgctcattaaataatatgccacacaagac 443
Query: 244 agcaactagtctgttttgttctctattctattctggatctgtgtcaggttcgtgggaagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 agcaactagtctgttttgttctctattctattctggatctgtgtcaggttcgtgggacgt 503
Query: 304 gcttaataagcaatttgctacatgaaagatttcaattgccaatgggatttgtgatgacaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcttaataagcaatttgctacatgaaagatttcaattgccaatgggatttgtgatgacaa 563
Query: 364 atagtacaggttaggtcacaattgtaaaagtacaacattggagctggagagatggcttag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 564 atagtacaggttaggtcacaattgtaaaagtacaacattggagctggagagatggctcag 623
Query: 424 tggttagctaagagcactgactgctcttccagaggtcctgagtttaattccc 475
||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 624 tggttagttaagagcaccgactgctcttccagaggtcctgagtttaattccc 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_m15.g1 MSMg01no356_m15.g1 CHROMAT_FILE:
MSMg01no356_m15.g1 PHD_FILE: MSMg01no356_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:37 2005
(462 letters)
>mm_chr18_42229349_42230210
Length = 862
Score = 797 bits (412), Expect = 0.0
Identities = 451/464 (97%), Gaps = 4/464 (0%)
Strand = Plus / Plus
Query: 1 aggaggcactgaaaacagaatcttgggagacagcgtt-aatgagacagcttctttgatag 59
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 201 aggaggcactgaaaacagaatcttgggagacagc-ttcaatgagacagcttctttgatag 259
Query: 60 gggaacaaaggctaattaaacctttgagtgttgggtagagggatctcacaatgggtgtac 119
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 gggaacaaaggctaattaaatttttgagtgttgggtagagggatctcacgatgggtgtac 319
Query: 120 attattggctaggatcagggcactgggcatg-cctcatttgcataaaaagggatttcagc 178
| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 320 actattggataggatcagggcactgggc-tggcctcatttgcataaaaagggatttcagc 378
Query: 179 aactgctggacatgaccttataaggggaaaggaagtttaacgtggctacccgctttgtga 238
|| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 379 aattgctggacatgaccttataaggggaaaggaagtttaacatggctacctgctttgtga 438
Query: 239 tctcctctggtaagcaaagataggggcaaagggctatgagcatcgggacacaggtccagg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tctcctctggtaagcaaagataggggcaaagggctatgagcatcgggacacaggtccagg 498
Query: 299 gcagtgggagagtgatcctactcttgccagtctcaggaccagatttcacaggtttggaca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcagtgggagagtgatcctactcttgccagtctcaggaccagatttcacaggtttggaca 558
Query: 359 tacctcaaccgggcctgctccccccaagtcccatggctccctggccccacagatttccat 418
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 559 tacctcaaccgggcctgctccccccaagtcccttggctccctggccccacagatttccat 618
Query: 419 tttggaaagctcctgtcattatgtgtgtgtagaagactgcttca 462
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tttggaaagctcctgtcattatgtgtgtgtagaagactgcttca 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
