Query= MSMg01no357_a23.b1 MSMg01no357_a23.b1 CHROMAT_FILE:
MSMg01no357_a23.b1 PHD_FILE: MSMg01no357_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:58 2005
(488 letters)
>mm_chr1_177050282_177051169
Length = 888
Score = 932 bits (482), Expect = 0.0
Identities = 486/488 (99%), Gaps = 2/488 (0%)
Strand = Plus / Plus
Query: 1 caaagtaaaacttgacaagtgcatgggtgtctggtgtctgatttgaaatacatacatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagtaaaacttgacaagtgcatgggtgtctggtgtctgatttgaaatacatacatatg 260
Query: 61 aaaataggtctctggattctttctattttggtttggctcagaagatagttgaaaggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaataggtctctggattctttctattttggtttggctcagaagatagttgaaaggaaat 320
Query: 121 ctttaaggtatctataagtcattttccatgatttctttctcttgctgtgcacctgtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttaaggtatctataagtcattttccatgatttctttctcttgctgtgcacctgtaatt 380
Query: 181 tattctagcaatgcctatataagtactctctactggtctgtctttattaaaagaaatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattctagcaatgcctatataagtactctctactggtctgtctttattaaaagaaatcaa 440
Query: 241 taaaagagaaagatatcttttcaaaataaaaatgaggttagacatgcaaatacacataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaagagaaagatatcttttcaaaataaaaatgaggttagacatgcaaatacacataac 500
Query: 301 acacacacacacacacacacacacacacacacacacacacacacacacacaaagaggtag 360
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 acacacacacacacacacacacacacacacacacacacacacacacaca--aagaggtag 558
Query: 361 tttctacagaggccagaaaccagaagagggtgttagatgcccagatgatggaactgtagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttctacagaggccagaaaccagaagagggtgttagatgcccagatgatggaactgtagg 618
Query: 421 tagctgtgagtcacccaacacaattaactgaacccaagtcctgtgggaaagagtagtata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tagctgtgagtcacccaacacaattaactgaacccaagtcctgtgggaaagagtagtata 678
Query: 481 ggcacata 488
||||||||
Sbjct: 679 ggcacata 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_a23.g1 MSMg01no357_a23.g1 CHROMAT_FILE:
MSMg01no357_a23.g1 PHD_FILE: MSMg01no357_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:58 2005
(409 letters)
>mm_chr1_177074680_177075488
Length = 809
Score = 791 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Minus
Query: 1 tcttataaggcccgtctatcaataaaaaaactgttctgagccttacattatgattacgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcttataaggcccgtctatcaataaaaaaactgttctgagccttacattatgattacgag 550
Query: 61 aggacaatgacttgtgccccaggaaatattcagtgaagtcctgtcaactgctccaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aggacaatgacttgtgccccaggaaatattcagtgaagtcctgtcaactgctccaagatg 490
Query: 121 ccatggaacctttcagatctacacagagagattttgcttgagggcactaagtaactacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccatggaacctttcagatctacacagagagattttgcttgagggcactaagtaactacac 430
Query: 181 aagactaatttccgctttccaaaaccatgctaaagtgacataagacagaccggggagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aagactaatttccgctttccaaaaccatgctaaagtgacataagacagaccggggagctg 370
Query: 241 aggtgttcttagatggtaatagagagccagggaaaacaaagcattcttactggcatatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggtgttcttagatggtaatagagagccagggaaaacaaagcattcttactggcatatca 310
Query: 301 ttgcagcaagactttacattaagcaaatttttttcctaaaggaacagattcaaaaccgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttgcagcaagactttacattaagcaaatttttttcctaaaggaacagattcaaaaccgat 250
Query: 361 cagttaccattggtagaaagcttactatgtctaaacatttgtgtttgag 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cagttaccattggtagaaagcttactatgtctaaacatttgtgtttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
