CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAAAGACAAATGCCAGTGAGGATATGGACAAAAAGGAGACCTTTA
GCACACTGCTGGTGGGACTAGCAAACTAGTCTTCAGCACTACAGAAGTCA
GCATGTAGGCTTCTCAAAGACCTAACATACACCCTCCATATGTCCCAGTT
ATACAATTTCTGGGTATTTGCCCAAAGGACACTAAACCAACGCATCAGAG
ACAACTGGTGTGATGGTTTGTATATGCTTGGCCCAGGGAGTGGCATTATT
GGAGGTGTGGCCTTGTTAAAGTAGATGTGTCACTGTGGGCGTGGAGTTAA
GACCCTCACCCTAGCTGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTCAG
AAGATGATGTAGAACTCTCAGCTCTGCCTGTACCATGTCTGCTTGGATGT
TGCCATGTTTCTGCTTTGCTGATAATGGACTGAACCTCTGAACTTATAAG
CCAGCCCTAATTAAATGTTGGTCTTATAAGAGTTGCCTTGCTCATGGGGT
CTGTTCACAGCAGTAAAACCCTTACTAAGATACCTGGGCCTCCGGGTTCA
CTGCAGCTTAGTGGAAGAGCCAACTTGGGTGGTCCGCGCCCCAAAAAGGA
ATTTTAGGAAAAGTGGGTTTTTTTTTTTACCTCTTAAAAAATAGGAATTT
CCTTCTTTTTCGTGAAAATGGTGGCCTTTTTGGAAACACCATACCCCCCA
AT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTACAAGGAATTTTCAGAAC
TAGGCATAGTGGGGCACTCTGGAACTCCAGCAGTCTGGAGGATGTGAGGC
CAGGATGGGCTATATAGTGAGCTTGAGACCAGCTTAGGGTGCAGAGTGAC
ACTGTCTCAAAGACCACAAGAACTACTGAAGGAACCAGTGGGAGGGAAGA
GAGAGAGGACAGACTGGGAAAACACAGCAAATGTGACACACAGGCGTGAG
AGGTCACAGAAAACCCGTCACCTTACACATTAACAGAGAAAAAACAGTAA
CAAAATACACAGTGTAAAGAAACATGGCTCATGTAAAAAAGGGACTCGTG
AAATGCAGACTGGTTACTTTGGGGGCTGCTGTCCCAGACTTGGACAAAAA
GGGAAGCCACATGGGAAGCAGAACCTCTGCCCTTCAATGACTGAATCTCA
AAATACCAGTGACAGGGATGGTCTAGCGACAGACTTTTGCCCACCATGCC
CAAGACCCTATGGTCAATTCCCAGAATAGCCAAACACCTAAAAATCTACC
ACTCGTCCCCTAAGCTCCTGCCCCACTTAAAGAATATGGTATTCCCCTTC
CAAAGAATTTTTTTGTGGTTTTCCTTCTTGGCAACAAGAGCCTTGTTTGG
AAAACTGGTTTGGTAATCCCCGTTGTCCATTTCCGTCCAGTCTTATTCTG
CTTA

Query= MSMg01no357_b09.g1 MSMg01no357_b09.g1 CHROMAT_FILE:
MSMg01no357_b09.g1 PHD_FILE: MSMg01no357_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:00 2005
         (441 letters)



>mm_chr1_194941270_194942110
          Length = 841

 Score =  837 bits (433), Expect = 0.0
 Identities = 439/441 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttacaaggaattttcagaactaggcatagtggggcactctggaactccagcagtctgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttacaaggaattttcagaactaggcatagtggggcactctggaactccagcagtctgg 260

                                                                       
Query: 61  aggatgtgaggccaggatgggctatatagtgagcttgagaccagcttagggtgcagagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggatgtgaggccaggatgggctatatagtgagcttgagaccagcttagggtgcagagtg 320

                                                                       
Query: 121 acactgtctcaaagaccacaagaactactgaaggaaccagtgggagggaagagagagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acactgtctcaaagaccacaagaactactgaaggaaccagtgggagggaagagagagagg 380

                                                                       
Query: 181 acagactgggaaaacacagcaaatgtgacacacaggcgtgagaggtcacagaaaacccgt 240
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 381 acagactgggaaaacacagcaaatatgacacacaggcgtgagaggtcacagaaaacccct 440

                                                                       
Query: 241 caccttacacattaacagagaaaaaacagtaacaaaatacacagtgtaaagaaacatggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccttacacattaacagagaaaaaacagtaacaaaatacacagtgtaaagaaacatggc 500

                                                                       
Query: 301 tcatgtaaaaaagggactcgtgaaatgcagactggttactttgggggctgctgtcccaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatgtaaaaaagggactcgtgaaatgcagactggttactttgggggctgctgtcccaga 560

                                                                       
Query: 361 cttggacaaaaagggaagccacatgggaagcagaacctctgcccttcaatgactgaatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttggacaaaaagggaagccacatgggaagcagaacctctgcccttcaatgactgaatct 620

                                
Query: 421 caaaataccagtgacagggat 441
           |||||||||||||||||||||
Sbjct: 621 caaaataccagtgacagggat 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)