Query= MSMg01no357_k01.b1 MSMg01no357_k01.b1 CHROMAT_FILE:
MSMg01no357_k01.b1 PHD_FILE: MSMg01no357_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:40 2005
(240 letters)
>mm_chr1_92652524_92653164
Length = 641
Score = 406 bits (210), Expect = e-118
Identities = 234/242 (96%), Gaps = 5/242 (2%)
Strand = Plus / Plus
Query: 1 atcggtgtgagccaccatttgctggaagctgaacccaggtcctctgca-gagcagcggga 59
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 199 atcggtgtgagccaccatttgctggaacctgaacccaggtcctctgcaagagcagcggga 258
Query: 60 gctctta-ccttgagccatctttctagcctagcctccagtcattttttttttctta-tgc 117
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 259 gctcttaaccttgagccatctttctagcctagcctccagtcattttttttt-cttaatgc 317
Query: 118 ctggcttaggaatgaccatgggacccacttgggcatcataatgccacctcctggcttc-g 176
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct: 318 ctggcttaggaatgaccatgggacccacttgggtatcagaatgccacctcctggcttcag 377
Query: 177 atttcccttggctttccatcagattgcattagaacctgtctattctttcccattattgaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atttcccttggctttccatcagattgcattagaacctgtctattctttcccattattgaa 437
Query: 237 aa 238
||
Sbjct: 438 aa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no357_k01.g1 MSMg01no357_k01.g1 CHROMAT_FILE:
MSMg01no357_k01.g1 PHD_FILE: MSMg01no357_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:40 2005
(222 letters)
>mm_chr1_92819446_92820067
Length = 622
Score = 371 bits (192), Expect = e-107
Identities = 213/222 (95%), Gaps = 4/222 (1%)
Strand = Plus / Minus
Query: 1 tctctgggtttaggaaagtgggacaaggggacctaactgcaaaggtcagaggggcatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctctgggtttaggaaagtgggacaaggggacctaactgcaaaggtcagaggggcatggc 285
Query: 61 tgggagacatcagattgtggaaggccatggaattaagcagccagatcctataacaagctt 120
|||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 284 tgggagacatcagattgtggaaggccatggaattaagcagccagctcctacagcaagctt 225
Query: 121 cagaggaaagagagagggagagcagtgtgtgtctttctgtgtgttgtgtatgtgttgtgt 180
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 224 cagaggaaagagagagggcgagcagtgtgtgtctctctgtgtgttgtgtatgtgttgtgt 165
Query: 181 gtagtgtgatgtgtgtatgtggcgtgtgtgtatatatatgtg 222
||||||||||||||||||||||||||||| |||||||||
Sbjct: 164 gtagtgtgatgtgtgtatgtggcgtgtgt----atatatgtg 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
