GCGGCGCTXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGTTT
AGATAAATACCCCATTTTTTAAAAATTGAATTATTTAGTTTGTTAATGTT
TAGTTTCTTGGGTTCTCTATGTATTTTGGACATTGTCCCTCTGTCAGAGA
TGGAGTTGGTGAAGGTCTTTTCCCACTCCATAGGTTATCGTTTTGTCCAA
TTGACCATGTCCTTGGCTTTACAGAAGCTCTCCAGTTTCATGGGATCGCA
TTCAAGTGTTGATCTTAGTGACTGTGCGCTTGGTATTCTGTTCAAGCAGT
TGTTTCCTGTGCTGATGCAATCAAGACTATTCCCCCACATTCTCTTCTAT
CAGTCACATGTAGGCTGCACCAGGCAGTTCAGTAGGAAGGTAAAGATCCC
AAGTGCAGGCAAAAGAGTCAGAGACAACTCTGTCTCCCACTGTTAGGTGC
CATCCTCCCCCAAAACCACCAAACTTTACAGTCATATATGCATAGAACAT
AGTACAAACCAATTCCTCTCTCATAAATTACACCCCAACCTCTGTCCACT
CTTCCTCGCACGCCCTTCTACCTCACTATACACTATCCCTTAAAGAAAGA
GAGCCTTCTGGTCTGAGCATGTGCCCTGAGCAGACCTTGGGAACTGGCTC
AGCACCCGGTCCCATAATGCCCAGAGGAAAGTCTACACCCAGGTGTTCTA
TCATGCAAGGNATCACANGTGAGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCTCTCTGTCTTTCCC
TCTCTCAATGTAAGTGTGTAAATTTAATATAGATTTTTAAAGTCGTACCT
ATAGTTCATGTCATAAAATATAAATTATACAGTGGATTTATTTTTATCTT
AAAACATGCCATCATTCTGTAAGCATATGTCCTGGCAAGAGGGCAGAGAC
ACTTAGAACTATCAGTCTTTTCAAAGGCCAGGCTATAAAGATAATGGTGA
CATAAAAATCACTAGTATCATAGAATGTTTAGTGTGCTCAATTTTACTAC
CAGTTTCCAACGCAGAAATTTACATCTCTTCTGAGTTATGAACAGAGACG
TAAAACTATGCCTACTAGATAAAGAACAAATGTTATTTTAAATGGATGAA
ATGGATGGGCAAGGCTTTTCATGATACAGTAAGCACTGGTTACAAACTCT
GAGGTGTTCTGTCAGGAGAGGGAAAGTTACTCAGTATTGAATTGGAATGC
CTTTCTGGTTTATATCAAGATAATAACCTATATTTCTTTACTCAAAGAAG
TTGAAAATGACACTCTTATCCATGATTTGAATTCATGCAGGAAAAATAAA
AATAAGAATTCTTATTTTTTTTAA

Query= MSMg01no358_b07.g1 MSMg01no358_b07.g1 CHROMAT_FILE:
MSMg01no358_b07.g1 PHD_FILE: MSMg01no358_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:16 2005
         (518 letters)



>mm_chr1_148188517_148189433
          Length = 917

 Score =  963 bits (498), Expect = 0.0
 Identities = 510/514 (99%), Gaps = 1/514 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgt 64
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 ctctctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgt 264

                                                                       
Query: 65  gtgtttctctctgtctttccctctctcaatgtaagtgtgtaaatttaatatagattttta 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 gtgtttctctctgtctttccctctctcaatgtaagtgtgtaaatttaatatagatttt-a 323

                                                                       
Query: 125 aagtcgtacctatagttcatgtcataaaatataaattatacagtggatttatttttatct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagtcgtacctatagttcatgtcataaaatataaattatacagtggatttatttttatct 383

                                                                       
Query: 185 taaaacatgccatcattctgtaagcatatgtcctggcaagagggcagagacacttagaac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaaacatgccatcattctgtaagcatatgtcctggcaagagggcagagacacttagaac 443

                                                                       
Query: 245 tatcagtcttttcaaaggccaggctataaagataatggtgacataaaaatcactagtatc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444 tatcagtcttttcaaaggccaggctataaagataatggtgacataaaaatcactagtgtc 503

                                                                       
Query: 305 atagaatgtttagtgtgctcaattttactaccagtttccaacgcagaaatttacatctct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atagaatgtttagtgtgctcaattttactaccagtttccaacgcagaaatttacatctct 563

                                                                       
Query: 365 tctgagttatgaacagagacgtaaaactatgcctactagataaagaacaaatgttatttt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctgagttatgaacagagacgtaaaactatgcctactagataaagaacaaatgttatttt 623

                                                                       
Query: 425 aaatggatgaaatggatgggcaaggcttttcatgatacagtaagcactggttacaaactc 484
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatgaatgaaatggatgggcaaggcttttcatgatacagtaagcactggttacaaactc 683

                                             
Query: 485 tgaggtgttctgtcaggagagggaaagttactca 518
           ||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaggtgttctgtcaggagagggaaagttactca 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space:   460756
Effective search space used:   460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)