XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAG
AAATAAGACTATAGAAAACCAAATATCTCAGTTAAAACATAAGGTACAGA
GCTAAACAAAGATTCTCAACTGAGGTATGTTGAGTGGCCGAGAAGAATAT
ACAAAAGATTGAACTTCTTTAGTTGTCAGGGAAAGGCAAATCAAAATGAC
TATGAGATTCCATTTTACACCAATCAGAATTACTAATAACAAAATCTCAA
TTGACAGCACATGCTGGACAGGATGTAGAGAAAGGGAAACAGTCCTTGAC
TGTTGCTGGGATTGCAAACTGGTAAAATATGGTGGTTATACAGAAAATTG
CAAAAAGTTCTACCTGAAGATCCAGCTATGCCACTACTAAGCTTATACCT
CAAAGACGTTCCAACATATAACAAGGACATGTGCTGTACTATGTTCATAG
CAGTCTTATTTATAATAACAAGAAGCTAGAAAAGACCCAGATGCCCCTCT
ACAGAAATATGGATACAGAAAATGTGGTACATTTACATAAAGGAATTCTA
TTCAGCTATTAAAAACTAAGACTTCATGAATTTTATAGGCAAATAGATGG
AACTAGAAAATATCATCCTGAGNTAGATAATCCAGACCCANNATGACATA
CATGGTATGTACTCAATGAAAAGTGTATATTAACCCCAAAGCTCAGATTA
GCAATGATACATCTCACAACC

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATTATATGTACATATGAATCAAGAATAGCATTCA
ATACAGACAGGAAATAGTTGTCACATCCATCGACTTAAACATCCATCACT
CCTTTTTGATAAGAATATTTCAAATCATCTGTACAAGCTCTCTTGAAATA
CATAATTATAAATTATCAACAGGCTGGAAAGCATTAGAAGTTGCTCTTTC
TTCCCAAATATATACATTTCCTGTTAACCATTTTTTTAATTCCCTTTGCT
ACCCTTATCAGCTCTAGAAATTACCACTCTGTGGTATACTTTTCTAAGTC
TATTTTTGAAATGGATCTATTGTAGAAAAGAGAATTTGGTATTGTTTTCA
AAATCACATTGAGGATTTCTTTATAATTAATTCCTTCCTTATATTTCATA
GACTATTTAGTTAATGCTGTTGTTTCTCTCACCCAGTTATATTTATAACT
TAATCTCTAAAGCTTGTATAAAACCATTGTAATAGTAAATAGTTAATATG
CTCTGAGGCAGGTGTGTGTGTATGTAGCTCTGTACTCTCCTAAGAGCTCT
GGATTCAAAAATGAAAACACACTTCTGTGTTTTCTAGGCCCCAGCATAGT
CTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAGATCTTGCTAGTG
TATGC

Query= MSMg01no358_c14.g1 MSMg01no358_c14.g1 CHROMAT_FILE:
MSMg01no358_c14.g1 PHD_FILE: MSMg01no358_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:21 2005
         (606 letters)



>mm_chr1_103333051_103334056
          Length = 1006

 Score = 1149 bits (594), Expect = 0.0
 Identities = 603/606 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attatatgtacatatgaatcaagaatagcattcaatacagacaggaaatagttgtcacat 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 attatatgtacatatgaatcaagaatagcattcaatacacacaggaaatagttgtcacat 260

                                                                       
Query: 61  ccatcgacttaaacatccatcactcctttttgataagaatatttcaaatcatctgtacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 ccatcgacttaaacatccatcactcctttttgataagaatatttcaaatcatctgtacat 320

                                                                       
Query: 121 gctctcttgaaatacataattataaattatcaacaggctggaaagcattagaagttgctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctcttgaaatacataattataaattatcaacaggctggaaagcattagaagttgctc 380

                                                                       
Query: 181 tttcttcccaaatatatacatttcctgttaaccatttttttaattccctttgctaccctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcttcccaaatatatacatttcctgttaaccatttttttaattccctttgctaccctt 440

                                                                       
Query: 241 atcagctctagaaattaccactctgtggtatacttttctaagtctatttttgaaatggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagctctagaaattaccactctgtggtatacttttctaagtctatttttgaaatggat 500

                                                                       
Query: 301 ctattgtagaaaagagaatttggtattgttttcaaaatcacattgaggatttctttataa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctattgtagaaaagagaatttggtattgttttcaaaatcacattgaggatttctttataa 560

                                                                       
Query: 361 ttaattccttccttatatttcatagactatttagttaatgctgttgtttctctcacccag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaattccttccttatatttcatagactatttagttaatgctgttgtttctctcacccag 620

                                                                       
Query: 421 ttatatttataacttaatctctaaagcttgtataaaaccattgtaatagtaaatagttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatatttataacttaatctctaaagcttgtataaaaccattgtaatagtaaatagttaa 680

                                                                       
Query: 481 tatgctctgaggcaggtgtgtgtgtatgtagctctgtactctcctaagagctctggattc 540
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatgctctgaggcaggtgtgtttgtatgtagctctgtactctcctaagagctctggattc 740

                                                                       
Query: 541 aaaaatgaaaacacacttctgtgttttctaggccccagcatagtctcacaagagacagct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaaatgaaaacacacttctgtgttttctaggccccagcatagtctcacaagagacagct 800

                 
Query: 601 atatca 606
           ||||||
Sbjct: 801 atatca 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space:   593616
Effective search space used:   593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)