Query= MSMg01no358_j22.b1 MSMg01no358_j22.b1 CHROMAT_FILE:
MSMg01no358_j22.b1 PHD_FILE: MSMg01no358_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:56 2005
(455 letters)
>mm_chr1_150680972_150681828
Length = 857
Score = 835 bits (432), Expect = 0.0
Identities = 447/453 (98%), Gaps = 2/453 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaatttatatccaaatgttcttgatcttgattgcatttttctgtccaaatcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcaaaatttatatccaaatgttcttgatcttgattgcatttttctgtgcaaatcta 264
Query: 65 taaactattccaactttgaaagattttaaattttatttccttttatctattgaagatttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaactattccaactttgaaagattttaaattttatttccttttatctattgaagatttg 324
Query: 125 acactagctctgtttgagttaaaacaaaaatgaatcctagctaatggccatactgtgaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acactagctctgtttgagttaaaacaaaaatgaatcctagctaatggccatactgtgaat 384
Query: 185 gaagacaagagtaaaagtagttgctatcacatagacactacataatctcaaataaca--g 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 385 gaagacaagagtaaaagtagttgctatgacatagacactacataatctcaaataacatag 444
Query: 243 gtatttttgacaatagatagcttcaagcattgtgcttgtatgaaggtcactccattacat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtatttttgacaatagatagcttcaagcattgtgcttgtatgaaggtcactccattacat 504
Query: 303 ttggtgattatgacatcaacattttccttagatctacttttggcttttccagccaaagta 362
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 505 ttggtgattatgacatcaacattttccctagatctacttttggcttttccagccaaagta 564
Query: 363 tgggtggtgaaccaaagtttcataaaaactacattctaaatctgacacataatggtgtgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgggtggtgaaccaaagtttcataaaaactacattctaaatctgacacataatggtgtgg 624
Query: 423 ctatatcttactagaagaagaanagaagaagga 455
|||||||||||||||||||||| ||||||||||
Sbjct: 625 ctatatcttactagaagaagaaaagaagaagga 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 857
Length adjustment: 10
Effective length of query: 445
Effective length of database: 847
Effective search space: 376915
Effective search space used: 376915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_j22.g1 MSMg01no358_j22.g1 CHROMAT_FILE:
MSMg01no358_j22.g1 PHD_FILE: MSMg01no358_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:56 2005
(369 letters)
>mm_chr1_150812111_150812879
Length = 769
Score = 629 bits (325), Expect = 0.0
Identities = 358/369 (97%)
Strand = Plus / Minus
Query: 1 attaagaatagtcaggaatcatttgacatgagtattgatctaaaagcataaaacattttt 60
|||||||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 414 attaagaatattcaggaatcatttgccatgagtattgatctaaaagaataaaccattttt 355
Query: 61 aaacctatcaaattatgaaaatcccaagtagcaaattttaagtcatatttgttttatttt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 354 aaacctatcaaattatgaaaatcccaagtagcaaattttaagttatatttgttttatttt 295
Query: 121 ctgaatattcatacatttatagactaacttagtgcaatcagggtattggttaggagcatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 294 ctgaatattcatacatttatagactaacttagtgcaatcagggtattggttaggagtatc 235
Query: 181 cactggaacatgggcatcttacctattaagagtttattattattatcatgaacatcatca 240
||||| ||||||||||||||| |||||||||||| |||||||||||||||| ||||||||
Sbjct: 234 cactgtaacatgggcatcttatctattaagagttcattattattatcatgaccatcatca 175
Query: 241 tcatgatcatcattattatcatcatcagaaacatataagtcagggatgatgatgcctgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 174 tcatgatcatcattattatcatcatcagaaacatataagtcagggatgatgatgcctata 115
Query: 301 ttgaaatgtgtaatttcaatattctggaagctcaggcagtagatcatgagcaccagattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttgaaatgtgtaatttcaatattctggaagctcaggcagtagatcatgagcaccagattt 55
Query: 361 gcttggaat 369
|||||||||
Sbjct: 54 gcttggaat 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
