XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTATCTTGTTT
ATTTGGAGCTTTGGGGCTAATATCCACTTAGCAGTGAGTACATACCATGG
GTGCTCTTTTGTGATTGGGTTACCTCACTCAGGATGATGTTGTTTAGTTC
TATCCATCTGCCTAAGAATTTCATGCATTCATTTTTTATAGCTGAATAGT
ACTCCATTGTGTGAATGTACCACATTTTTCTGTACCCATTCCTCTGTTGA
GGGACATCTGTGTTCTTTACAGCTTCTGGCTATTATAAATAAGGTTTCTA
TGAACATAGTGGGGCATGTGTCTTTATTACATGTTGGAGCATCTTCTGGG
TATATGCCAAGGAATGGTATAGCTCATTCTTAAGATAGGATTATGTCCAA
TTTTCTGAGGCACCACCAAACTGATTTCCAGAGTGATTGTACCACCTTAC
AATCCCACCAGCCATGTAGGAGTGTTTCTTTTTCTCCACATCCTTGCCAG
CATCTGCTGTCACCTGAGTTTTTTATTTTAGCCATTTTGAGGTAGAAGCT
TAGGGTTGTTTTCATTTGTATTTCTCTGATGACTAAGAAACTTGAACATT
TCTTAAAGTGTTTCTTGGGCATTCGATATTCCTCAGTTGAAAATTCTTTC
TTTAGCTCTGTACCCCATTTTTTAAAAAACTATTTGATTTCTTGAGGCCC
ACCTCTTGAGTCTCCGATATATTGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCATTTGCAAAGGCCCCATTGGTTTCCAGAATATAGGAGCAA
TATGGGTCTCTAGGATTCAGGCATGCATATCTTTTAGGGGTAGAAAACTT
TTAATCTACCATCTCCCAGAGTAGAAAATAGTAACTCTTGGTTTTTATTA
TTATTGATGATAATTTTTATCATATTGATATTGTTATTCTATTATTGTTG
AAAATTATTACATTGATTTTGATCTCCTGTCAGTTGCTATCATCATCAAA
ATAGCTTTGCAAGCATTATTTCTACAGTAGAACATCTCCTTGCTAGGGTA
TGACAACTCCCAAGCTTTTCTCTCCTCTTCTCAACTTATCTTCCTCCAGT
TATTTTCACCAAAATGAGTGATCTTTTCGAATATAAGTTTGACGGATAGT
GAGATAGCTCAGTGAGTAAAAGATACTCGCTCCCAAGCTTAATGACCTGA
ATTCAATCCTTGGAGCCACATAACATTGGTAAGAGAGAAACACCTCAATG
GAGTTATCTACTGACCTCTATATATGGGCTATGACATGCGAAAAAAATTA
CTATGTACTTGTACAGTTAAACAAAATCCATGTTTGGTCGGAAGTAGTTT
ATCAACTTTCAAGGTTGGAGTGACTCTTTGTCACTTGATGCCTCTCATTG
GATTATCTCTTTTACTTCATCTGC

Query= MSMg01no359_d01.g1 MSMg01no359_d01.g1 CHROMAT_FILE:
MSMg01no359_d01.g1 PHD_FILE: MSMg01no359_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:38 2005
         (588 letters)



>mm_chr1_68169310_68170297
          Length = 988

 Score = 1137 bits (588), Expect = 0.0
 Identities = 588/588 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   catttgcaaaggccccattggtttccagaatataggagcaatatgggtctctaggattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 catttgcaaaggccccattggtttccagaatataggagcaatatgggtctctaggattca 731

                                                                       
Query: 61  ggcatgcatatcttttaggggtagaaaacttttaatctaccatctcccagagtagaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggcatgcatatcttttaggggtagaaaacttttaatctaccatctcccagagtagaaaat 671

                                                                       
Query: 121 agtaactcttggtttttattattattgatgataatttttatcatattgatattgttattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 agtaactcttggtttttattattattgatgataatttttatcatattgatattgttattc 611

                                                                       
Query: 181 tattattgttgaaaattattacattgattttgatctcctgtcagttgctatcatcatcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tattattgttgaaaattattacattgattttgatctcctgtcagttgctatcatcatcaa 551

                                                                       
Query: 241 aatagctttgcaagcattatttctacagtagaacatctccttgctagggtatgacaactc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aatagctttgcaagcattatttctacagtagaacatctccttgctagggtatgacaactc 491

                                                                       
Query: 301 ccaagcttttctctcctcttctcaacttatcttcctccagttattttcaccaaaatgagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ccaagcttttctctcctcttctcaacttatcttcctccagttattttcaccaaaatgagt 431

                                                                       
Query: 361 gatcttttcgaatataagtttgacggatagtgagatagctcagtgagtaaaagatactcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gatcttttcgaatataagtttgacggatagtgagatagctcagtgagtaaaagatactcg 371

                                                                       
Query: 421 ctcccaagcttaatgacctgaattcaatccttggagccacataacattggtaagagagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctcccaagcttaatgacctgaattcaatccttggagccacataacattggtaagagagaa 311

                                                                       
Query: 481 acacctcaatggagttatctactgacctctatatatgggctatgacatgcgaaaaaaatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acacctcaatggagttatctactgacctctatatatgggctatgacatgcgaaaaaaatt 251

                                                           
Query: 541 actatgtacttgtacagttaaacaaaatccatgtttggtcggaagtag 588
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actatgtacttgtacagttaaacaaaatccatgtttggtcggaagtag 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space:   565284
Effective search space used:   565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)