Query= MSMg01no359_d23.b1 MSMg01no359_d23.b1 CHROMAT_FILE:
MSMg01no359_d23.b1 PHD_FILE: MSMg01no359_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(420 letters)
>mm_chr1_4828647_4829465
Length = 819
Score = 781 bits (404), Expect = 0.0
Identities = 413/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 5 gaattcttattagcaatgtccataagaaaagatactgaatcaaaccaggtaaaggatgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaattcttattagcaatgtccataagaaaagatactgaatcaaaccaggtaaaggatgaa 560
Query: 65 aatatatatttagaatgtatgggcctctaccttcaagaaaacatatcaatacagattttc 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatatatattcagaatgtatgggcctctaccttcaagaaaacatatcaatacagattttc 500
Query: 125 acatacagaatggctaaagaatagtctgaaattatagttttcattttcctttcttcataa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acatacagaatggctaaagaatagtctgaaattatagttttcattttcctttcttcataa 440
Query: 185 aaagtcttagacataaactcaaaattagattttaaattatttttccaaaacaggatttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaagtcttagacataaactcaaaattagattttaaattatttttccaaaacaggatttaa 380
Query: 245 aatgaatacagatggtatgtactagacaccttagaaattcgcaacacactgtgttgggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatgaatacagatggtatgtactagacaccttagaaattcgcaacacactgtgttgggaa 320
Query: 305 ctataattctgtcatctgtctaggtgccatcaccctgaccaggcccccacttgctgtacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctataattctgtcatctgtctaggtgccatcaccctgaccaggcccccacttgctgtacc 260
Query: 365 acatggggatatgggagacttggtgatctcagcagtaatgttctttctctcgggac 420
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 259 acatggggatatgggagacttggtgatctcagca-tgatgttctttctctcgggac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 819
Length adjustment: 9
Effective length of query: 411
Effective length of database: 810
Effective search space: 332910
Effective search space used: 332910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_d23.g1 MSMg01no359_d23.g1 CHROMAT_FILE:
MSMg01no359_d23.g1 PHD_FILE: MSMg01no359_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:42 2005
(347 letters)
>mm_chr1_4646568_4647314
Length = 747
Score = 663 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 1 caaacaaaaccacaaacatcaatgatagaaaatgaacaacatattgaatgggcattaaca 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 caaacaaaaccacaaacatcaatgatagaaaatgagcaacatattgaatgggcattaaca 260
Query: 61 aattaaatgtcagaaaacaggcatctggaaatgtgctcatgtcataagtggttatggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattaaatgtcagaaaacaggcatctggaaatgtgctcatgtcataagtggttatggaag 320
Query: 121 tacaaactcaaatggcaatggtaggtgggatgacagatggctcagggtttgacccacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaactcaaatggcaatggtaggtgggatgacagatggctcagggtttgacccacaca 380
Query: 181 ttaaccattactatcaactcatcagcaggaacaattagtttcataaaattaagattagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaccattactatcaactcatcagcaggaacaattagtttcataaaattaagattagct 440
Query: 241 gttagtttccattttaaaagttttaaacaaaagctacattttggatctactgtacaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttagtttccattttaaaagttttaaacaaaagctacattttggatctactgtacaaaca 500
Query: 301 tcagagttcctttgtcctgctctggagagtgacagtattttctctgt 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagagttcctttgtcctgctctggagagtgacagtattttctctgt 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
