XXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTTAAGAATGCTGCC
TATTCAGTGACATTCAGAATTGCCTCTAGTATTGTAAGAGAGATAGTGAA
AGAAATCAGGCATTACTATCTACTACATAGAGTTAGAAATCTCAGGGCAA
GCTACTCCCTTATGCAAGAATTTACCATTATCTAGGAAGAAGGAAGGCTG
TGGTCTGAGAAGGAACTTGAGTAAATATTTAGAACTATACATAGCTGGGT
TACACCATACACAGGAATTTACACCGGCCTAGTGGGAAGGTAGACTACAC
AATAGACTAGAATTGAAACTATTCCAAGGGCATGAAGCCCTTGCCTCTGA
CTTCTAAGATTAAGCTGACCTAAGTTGGGGCTGCTTTTGATCCTAGTTGT
TAACATTGAATTTTATCCCATTTGGTTCATGTTAGCTTTTTGTATGCATT
CCTCTGTTTTGTGTAAAGTCACTTATAAGACTGGTGCTCACTTTGAGACA
AAAGACATTCAGATATCACCCTTTTCCCTGTGTTGNGGGTATCACCCCCT
TCTCTTCAACTCTATTGGCCATTTGGCTGGGAAACCCGAGGTTTCCCCCG
ATTTGAGGGGGCCCCGAATTGAGGCCTTCTCCGGGTTAAAAAAATTGGGC
CGGGCGCCTCCCCTGGGATGATATTTTTTTTTCTTTTACCCGATATTCCC
TCTCTTTTGTTTTCTCCCCCCTTCCTTTTTAAATCTTATTTTCTCGGTTT
ATATTACCCCTCCCCTCTCCTCTTCCCATTATTCGCCCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXAAAGTCTAAAGGCATCTACAATTTTCTCCTTAAATGAACATGAGTCC
CAAGTTCTCCCTTACCAAGGGGTGTCACTTACCTTATTTTCATTAATTGG
AAAGGGGAAAAAACCCTGGCAAATAACATCTAGAGTCAAGATTTACAACA
TTATTTTATAAGTTATAAGAATAAGCTAGTTGTATATTTAAAATCAGGCA
CTGTCCATGACTTGTATTCCATTTAAACAACTGTAAAACATTAATGTTAT
TGCTTTCAAAACTGACCATATCATGTCTAGTTTTATAATAGTGTAATCAG
AAGGAAAAGAATACAAAAGTTTTAATTATTTGCTACCATTAAATTGAGAA
ATAAAATTTGAAGATCATAATTTAATCCTGAATATCTGGTGCTAGAAGAT
TTTCGCTATTTTATAGTTTCACTACATACATGAAGCTTAAAGTTATGGTA
CTTGTTTCAAATTTTTCTTTCAGTGGGACAATGCTATGTTTTGACTAATC
TCTTGTTATAACTTTATAAAACTAGAAAAAATAAATAAAACCCTATGCAC
AAAACTTTGGTCTATAAGAACAGAATTGGCCCTTTCCAAATCTCATACGT
AATGTTCGAACTTAACCCAAAGATGCTTCTATTAACCAACTCCCCGGAGT
TAACTCTTTTACCCCCCCATCATTTCTCTTACCCCCCCCCCTTTATTTGT
CCCTTAACN

Query= MSMg01no359_h20.g1 MSMg01no359_h20.g1 CHROMAT_FILE:
MSMg01no359_h20.g1 PHD_FILE: MSMg01no359_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:00 2005
         (474 letters)



>mm_chr1_112012699_112013572
          Length = 874

 Score =  901 bits (466), Expect = 0.0
 Identities = 472/474 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagtctaaaggcatctacaattttctccttaaatgaacatgagtcccaagttctccctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaagtctaaaggcatctacaattttctccttaaatgaacatgagtcccaagttctccctt 615

                                                                       
Query: 61  accaaggggtgtcacttaccttattttcattaattggaaaggggaaaaaaccctggcaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 accaaggggtgtcacttaccttattttcattaattggaaaggggaaaaaaccctggcaaa 555

                                                                       
Query: 121 taacatctagagtcaagatttacaacattattttataagttataagaataagctagttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 taacatctagagtcaagatttacaacattattttataagttataagaataagctagttgt 495

                                                                       
Query: 181 atatttaaaatcaggcactgtccatgacttgtattccatttaaacaactgtaaaacatta 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 494 atatttaaaatcaggcactgtccaggacttgtattccatttaaacaactgtaaaacatta 435

                                                                       
Query: 241 atgttattgctttcaaaactgaccatatcatgtctagttttataatagtgtaatcagaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atgttattgctttcaaaactgaccatatcatgtctagttttataatagtgtaatcagaag 375

                                                                       
Query: 301 gaaaagaatacaaaagttttaattatttgctaccattaaattgagaaataaaatttgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaaaagaatacaaaagttttaattatttgctaccattaaattgagaaataaaatttgaag 315

                                                                       
Query: 361 atcataatttaatcctgaatatctggtgctagaagattttcgctattttatagtttcact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atcataatttaatcctgaatatctggtgctagaagattttcgctattttatagtttcact 255

                                                                 
Query: 421 acatacatgaagcttaaagttatggtacttgtttcaaatttttctttcagtggg 474
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 254 acatacatgaagcttaaagttatggcacttgtttcaaatttttctttcagtggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)