NTCCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAAGTTCCCAGGAACACTCATAAAAGCAAGCTAGTCATGATGG
AAGTCATCTTATTAATGTCTCAAATAAATGAGCAATTTTACAGTATGTAA
ATAACTATACGGCATCTTTGCCTGCTTCTATGATTAAAACATCATTATAA
ATTCTGCCCCAGCCTCCTATGGCTGGGGCACCTAGGTTAAAATTAAAAAT
GAAGTTAGCCCAAGTGCTTTTCTGGAATCCTTGATCTGGTAATGATTAAA
CAAGATCTTGAGCTGGAAGGAGGAACTAACTGATGACAGACAGGTGCTCT
GACATGAGAAAGAACATAGAAAGAACGTATAAATTATTTCCTTTTTTGCT
GCTTAATTTCATTAAGGTTTCTTGATTTTGGAGAATATGTGCCTTCTGTT
CTTTATCCACAGGGTCTCGTATGCAGCTAGTATTGAGGTTTGTGATTTTA
AAGCTAAGAAAGGAGAGAATGGCAGCAGGAAGAGAGGATTCTAAAAGCAT
CTTCTACTCATGTGGCCAGTTTACCTTAGGCAGCATTCAGAGGGCCTTCT
TGTTTGCAGAATTTAATTTACCAGAGTGTGGGATGAATCANACATTAGAA
CAAAGGTGAACTATCCTTACTTAATCTCTCAGGNCTTACCAAAGCCTTTA
TTGAGACAGTGTGAAAGTTGGTTATTTGCTTTTGCCTAGATTGAAAGACT
CCAAAATAAAAT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGCCCTAGATACCTAGTGAG
AACGGGGTGGGAGTGTTCCAGGTTATCTGTTGGCCTGGGAAAGAAGTAGC
CAGAGGAAGCCAGAGTGGGTACCTTAAGCATAGACCCTAATTAGCAGCTC
AGATGCTCAATCCAAGGATATCTGTGTGTGTCTGTGTGTGTGGGTGGGTG
TGTGGGTGTGNCNNNTCNNGNNTATTTCTGTTTNATTTTTTTCTTGTGTN
NTTGTTTTTCTTTTNTCCNTTTTTTTTTTTTTCNCTGTGCCCTCGCTTGT
TGGGTTTGGTTTTGTTCCCCTTCTTCCCCTTTTCCCTGTTTTTCGCTTCC
GCCTTTCCTCTTCTCTTTTTCTTTTTTCTCTTCTCCCCCCCCTTTTTTTG
CCCCCTTTCCCCTTTTTCTTTCCCCTCTCTTCCTTTCCCTTTTCTTTTCT
TCTTCCTTTTTCCCCCTTTTCCTTCCCCTTTCCCCTTTCTTGTTTTCCCC
CTTTTGCCCTTTTTCCCCCTTTCCCTCTTTCCTTTTCTTTCCCGCTTCTT
CGCCCCTTTCCCCTTCCCCCCCCTCTTTTTTTCCTTCCCTTTTCCTTCGT
CTTCTTTTTTCTCCCCCTCTTTTCCTCGCTCCCTCCCCTTTCCCTCCTCT
TTTTTCTCTTTTTTTCGGCTCTTCTTCTCTCCTCTCTCTCCTTCTTTTCC
TTCCTTTTCTTCTCCCTTTTTTTCCCCTTCTCCCCCCTTTCGCCCTTTTC
TGTGCCGCCCTTCTTTCGCCCCTTTCTTCCCTG

Query= MSMg01no361_a19.b1 MSMg01no361_a19.b1 CHROMAT_FILE:
MSMg01no361_a19.b1 PHD_FILE: MSMg01no361_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:58 2005
         (566 letters)



>mm_chr1_65191020_65191985
          Length = 966

 Score = 1040 bits (538), Expect = 0.0
 Identities = 556/562 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaagttcccaggaacactcataaaagcaagctagtcatgatggaagtcatctta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaattcaaagttcccaggaacactcataaaagcaagctagtcatgatggaagtcatctta 707

                                                                       
Query: 65  ttaatgtctcaaataaatgagcaattttacagtatgtaaataactatacggcatctttgc 124
           |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 706 ttaatgtctcaaataaatgagcaattttacagtatgtaaataactacatggcatctttgc 647

                                                                       
Query: 125 ctgcttctatgattaaaacatcattataaattctgccccagcctcctatggctggggcac 184
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 646 ctgcttctatgattaaaacatcattataaattctgtcccagcctcctatggctggggcac 587

                                                                       
Query: 185 ctaggttaaaattaaaaatgaagttagcccaagtgcttttctggaatccttgatctggta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctaggttaaaattaaaaatgaagttagcccaagtgcttttctggaatccttgatctggta 527

                                                                       
Query: 245 atgattaaacaagatcttgagctggaaggaggaactaactgatgacagacaggtgctctg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atgattaaacaagatcttgagctggaaggaggaactaactgatgacagacaggtgctctg 467

                                                                       
Query: 305 acatgagaaagaacatagaaagaacgtataaattatttccttttttgctgcttaatttca 364
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 acatgagaaagaacgtagaaagaacgtataaattatttccttttttgctgcttaatttca 407

                                                                       
Query: 365 ttaaggtttcttgattttggagaatatgtgccttctgttctttatccacagggtctcgta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 406 ttaaggtttcttgattttggagaatatgtgccttctgttctttatccacagggtctcata 347

                                                                       
Query: 425 tgcagctagtattgaggtttgtgattttaaagctaagaaaggagagaatggcagcaggaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 346 tgcagctagtattgaggtttgtgattttaaagctaagaaaggagagaatggcagcagaaa 287

                                                                       
Query: 485 gagaggattctaaaagcatcttctactcatgtggccagtttaccttaggcagcattcaga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gagaggattctaaaagcatcttctactcatgtggccagtttaccttaggcagcattcaga 227

                                 
Query: 545 gggccttcttgtttgcagaatt 566
           ||||||||||||||||||||||
Sbjct: 226 gggccttcttgtttgcagaatt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space:   531536
Effective search space used:   531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)