NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATAAAATTCTTAAGCAGATGGTTGGAACTAGAAAATATCATC
TTGAGTGAAGTAACCCAGTAACAAAAGAACACACGTGGCATGCACTCACT
GATAAGTAGATATTAGCCCAAAAGCTCAAAATACCCAAGATACAATTCAC
AGACCACATGAAGCTCAGGAAGAAGGAAGACGTATGGATACTTCAGTCCT
TCTTAGAAGGCAGAACAAAATACCCATGGAAGGAGATACAGAGAAAAAGT
GTGGAGCAGAGTATGAAGGAAAGACCACCCAGAGACTACCTCACCTGGGG
ATCCATCCCATATACAGTCACCAAATCCAAACATTATTGTGGATGTCAAA
AAGTGCTTGCTGACAGGAGTCTGATATAGCTGTCTCCTGAGAGGCTCTGC
CAGTGCCAGATAAATACAGAAGTGGATGCTCACAGCCATCCATTAGACAA
AGCACAGGTTCCCCAAAAAAGTAGCTAGAGAAAGGACCCAAGGAACTGAA
GGGGTTTGCAAGCCCCATAGGAGGAACAACAATATGAACCAGCCAGTGCC
CCCACCCCCATAGCTCCCAGAGACTAAATCACCAACTGAAGAGTACACAT
GGAGGGACCCATGGCTCCAGCTGTATATGTAGCAGAGGATGGCTTGTTAG
ATATCAATGTGAAGAGAGGCCCTTGGTTCTGAGAAGGCTCAATGCCTCAG
TGTAGGGG

NNCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTGTTGTACAGTTTTTGCC
AGATTCATCTCATGAGAGAGCTAACCAGAAATGATTTCAAGACAAAAATA
CAAGAAAACACAGAGTACCCATTATTATAGTTATTTTTCTCTGTAAAATA
GCTGGCATTATTACAGAACATGATCTTTTACTTCTGCTTTACTTTTGAAT
AGGTGTAACCTCTGCTCTAATTCACACTAATTACTACTAAGAGTTTGACA
CTGTTCCAATCATATTTGTATAATAATTTGATCCACACAACTATATTGCC
AGAGAGCATGGCTCACATGTAGTAGAGAAATTCAGGCACAAATATTATTT
AAAGAGATACCAAGAGGAAGATATCTACAGAGAGAACTAAATCAAAAGAC
AGTGCACCCCATAATCAGCATCCAAACGCTGACACCACTGCATACACTAG
CAAGATTTTATTGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATG
CCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTAATGGATG
GATCATAGGGCTCCCAATGGAGGAGCTAGAGAAAGTAGCCAAGGAGCTAA
AGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACC
CCGGAGCTCTTGACTCTAGCTGCATATATAACAAAAGATGGGCCAGTCCG
CCATCCCTGG

Query= MSMg01no361_e04.g1 MSMg01no361_e04.g1 CHROMAT_FILE:
MSMg01no361_e04.g1 PHD_FILE: MSMg01no361_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:15 2005
         (555 letters)



>mm_chr1_149145583_149146539
          Length = 957

 Score = 1058 bits (547), Expect = 0.0
 Identities = 554/557 (99%), Gaps = 2/557 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctgttgtacagtttttgccagattcatctcatgagagagctaaccagaaatgatttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgttgtacagtttttgccagattcatctcatgagagagctaaccagaaatgatttca 260

                                                                       
Query: 61  aga--caaaaatacaagaaaacacagagtacccattattatagttatttttctctgtaaa 118
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagacaaaaatacaagaaaacacagagtacccattattatagttatttttctctgtaaa 320

                                                                       
Query: 119 atagctggcattattacagaacatgatcttttacttctgctttacttttgaataggtgta 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagctggcattattacagaacatgatcttttacttctgctttacttttgaataggtgta 380

                                                                       
Query: 179 acctctgctctaattcacactaattactactaagagtttgacactgttccaatcatattt 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctctgctctaattcacactaattactactaagagtttgacactgttccaatcatattt 440

                                                                       
Query: 239 gtataataatttgatccacacaactatattgccagagagcatggctcacatgtagtagag 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtataataatttgatccacacaactatattgccagagagcatggctcacatgtagtagag 500

                                                                       
Query: 299 aaattcaggcacaaatattatttaaagagataccaagaggaagatatctacagagagaac 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattcaggcacaaatattatttaaagagataccaagaggaagatatctacagagagaac 560

                                                                       
Query: 359 taaatcaaaagacagtgcaccccataatcagcatccaaacgctgacaccactgcatacac 418
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 taaatcaaaagacagtgcaccccataatcagcatccaaacgctgacaccattgcatacac 620

                                                                       
Query: 419 tagcaagattttattgaaaggacccagatgtagctgtctcttgtgagactatgccggggc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagcaagattttattgaaaggacccagatgtagctgtctcttgtgagactatgccggggc 680

                                                                       
Query: 479 ctagcaaacacagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctagcaaacacagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa 740

                            
Query: 539 tggaggagctagagaaa 555
           |||||||||||||||||
Sbjct: 741 tggaggagctagagaaa 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 957
Length adjustment: 10
Effective length of query: 545
Effective length of database: 947
Effective search space:   516115
Effective search space used:   516115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)