TCTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACC
AGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAA
AATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATA
GTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGG
GATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATA
TGATAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAAC
CTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAA
GTCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTA
GGGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGC
GTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATC
TCTGAAGAAAGAAATTAAGGAAGATCTCAGAAGATGGAAAGATCTCCCAT
GCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAA
GCAATCTACAGATTCAATGCAATCCCCATCATAATTCCAACTCAATTCTT
CAACGAAATGGAAGGAGCAATTTGCAAATTTGTCTGGAATAACAAATAAC
CAGGAN

NTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTAACCTAAACTGTAAGGAAG
GGCAAACATTCAATCATAAATACTATGGTATTTTTATAATATTAAAATTA
TTTAGAATGTTCAGTATTTAAAATATTTAAGTATTCTCTATATTAATGCA
TATTAGATAGTTAGAATAATTAATACACACATATTTGTAGTGCATTTTTA
GAAGACTATACATTGAAGACTTCTCTTAAGTCTGGGAAGCTCTCATATAG
TTCAAGGATGAGAGGGGTGTTCACTGCAGATCTATAACATGCTATGAATT
GTGGGCACTTCGGATGGGATGATGGCAGGATAAAAAAACCTAGTTGGTTG
CCTGGCATAGCAGAGGATGCCTTTAATCAGAGCTCTTGGAAGGCAGTGGC
AAGTAGATGCTCCCTTGTTTCTGTGGTTTCCTGCCATCTCTGCACCCCAT
CAGAAGAGGCTCTGTAGAGTCGGGACTGTATGCTTCCTTTAGAGCCTGCC
CACTAGCATGTGCTCACACAGGCCTTTCATTCTGCATGCCATTTCCCACC
ATGCTTCCTTCGGGTCCTATGACAATGACACAAGCTTCCTACGCTGTATT
TGCTCCTTCTATTTTGTTGCCTTCTCTCCACATCCCCTAGCATTTAGCTG
AGGTGTCAACACCCTAAGAAGCTGCTTGTGATGTGTCTCTTTTCCAGATT
CCCCAA

Query= MSMg01no361_l02.g1 MSMg01no361_l02.g1 CHROMAT_FILE:
MSMg01no361_l02.g1 PHD_FILE: MSMg01no361_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:48 2005
         (581 letters)



>mm_chr1_60964371_60965351
          Length = 981

 Score = 1077 bits (557), Expect = 0.0
 Identities = 575/581 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaacctaaactgtaaggaagggcaaacattcaatcataaatactatggtatttttataa 60
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttaacctaagctgtaaagaagggcaaacattcaatcataaatactatggtatttttataa 536

                                                                       
Query: 61  tattaaaattatttagaatgttcagtatttaaaatatttaagtattctctatattaatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tattaaaattatttagaatgttcagtatttaaaatatttaagtattctctatattaatgc 476

                                                                       
Query: 121 atattagatagttagaataattaatacacacatatttgtagtgcatttttagaagactat 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atattagatagttaggataattaatacacacatatttgtagtgcatttttagaagactat 416

                                                                       
Query: 181 acattgaagacttctcttaagtctgggaagctctcatatagttcaaggatgagaggggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 acattgaagacttctcttaagtctgggaagctctcatatagttcaaggatgagaggggtg 356

                                                                       
Query: 241 ttcactgcagatctataacatgctatgaattgtgggcacttcggatgggatgatggcagg 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 355 ttcactgcagatctataacatgctatgaattgtgggcacttgggatgggatgatggcagg 296

                                                                       
Query: 301 ataaaaaaacctagttggttgcctggcatagcagaggatgcctttaatcagagctcttgg 360
           ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 295 ataaaaaaacctagttggttgcctggcatggcagaggatgcctttaataagagctcttgg 236

                                                                       
Query: 361 aaggcagtggcaagtagatgctcccttgtttctgtggtttcctgccatctctgcacccca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aaggcagtggcaagtagatgctcccttgtttctgtggtttcctgccatctctgcacccca 176

                                                                       
Query: 421 tcagaagaggctctgtagagtcgggactgtatgcttcctttagagcctgcccactagcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tcagaagaggctctgtagagtcgggactgtatgcttcctttagagcctgcccactagcat 116

                                                                       
Query: 481 gtgctcacacaggcctttcattctgcatgccatttcccaccatgcttccttcgggtccta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gtgctcacacaggcctttcattctgcatgccatttcccaccatgcttccttcgggtccta 56

                                                    
Query: 541 tgacaatgacacaagcttcctacgctgtatttgctccttct 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  tgacaatgacacaagcttcctacgctgtatttgctccttct 15


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)