Query= MSMg01no362_p24.b1 MSMg01no362_p24.b1 CHROMAT_FILE:
MSMg01no362_p24.b1 PHD_FILE: MSMg01no362_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:34 2005
(433 letters)
>mm_chr1_176466726_176467558
Length = 833
Score = 830 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Minus
Query: 5 gaattctcctacttacatcaaatggagctgaactggacccagcgttctgattacacggtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaattctcctacttacatcaaatggagctgaactggacccagcgttctgattacacggtt 574
Query: 65 ccctgaagcagtcactgaaaggaagtagaagacccatggcgatgatccgggagcaaaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ccctgaagcagtcactgaaaggaagtagaagacccatggcgatgatccgggagcaaaatt 514
Query: 125 tttctgcttcctctggaggcccgttctcctgctggctaaacagcttctccagcagtgttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttctgcttcctctggaggcccgttctcctgctggctaaacagcttctccagcagtgttc 454
Query: 185 tccctgcatgtgaaacacagtcattagaggggggcgttggcagatcacctggctcagcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tccctgcatgtgaaacacagtcattagaggggggcgttggcagatcacctggctcagcac 394
Query: 245 tctcccgagaggacagtaaacatcaccagtgagcaacggtctccaaggctacttgtgtgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tctcccgagaggacagtaaacatcaccagtgagcaacggtctccaaggctacttgtgtgg 334
Query: 305 agaaaggagcccaatgaaccaaactgcagggtgaggccaggcaccacataggaaaaggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agaaaggagcccaatgaaccaaactgcagggtgaggccaggcaccacataggaaaaggca 274
Query: 365 ggagggtatgctcttccagggtcccaaacacagcctgcctcaaaaaagaatggcctctat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggagggtatgctcttccagggtcccaaacacagcctgcctcaaaaaagaatggcctctat 214
Query: 425 tactgactg 433
|||||||||
Sbjct: 213 tactgactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_p24.g1 MSMg01no362_p24.g1 CHROMAT_FILE:
MSMg01no362_p24.g1 PHD_FILE: MSMg01no362_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:34 2005
(450 letters)
>mm_chr1_175195312_175196162
Length = 851
Score = 650 bits (336), Expect = 0.0
Identities = 423/452 (93%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 1 tccaggtttccaaaactgacgctgcattgaatttcgaggaagtgcaccaattaatactga 60
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 651 tccaggtttccaaaactgactctgcattgaattttgaggaagtgcaccaattaatactga 592
Query: 61 taacttgagggaaggccctaaatgttaacttgtctgtattggaaagcagcttatttcata 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 591 taacttgagggaaggccctaaatgttaactagtctgtattggaaagcagcttatttctta 532
Query: 121 aaatttatt-aaataagtaagatccggttgctgcattggattactggaggccagggcttg 179
||||||||| |||||| |||||||| |||||||||| ||||||||||||| |||||||||
Sbjct: 531 aaatttattcaaataaataagatcctgttgctgcatcggattactggaggtcagggcttg 472
Query: 180 tctggctcagctttaaccctcagttgatttccttaggtctcactgataaatgcctcatct 239
||||| ||||||| | | ||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 471 tctggttcagcttcagctctcagttgatttccttaggtctcacggataaatgcctcatgt 412
Query: 240 ttacagccatttacagaaaaatgtcacccacactgggaaaaggcaggagtcaatcttaga 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 411 ttacagccatttacagaaaaatgtcacccacactgggaaaaggcaggagtcaatctcaca 352
Query: 300 cctcttcctgtgttccctttggcttattcctgctacttcctggaaataaaatgaaaagac 359
||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 351 cctcttcctctgttccctttggcttattcctggtacttcctggaaataaaacgaaaagac 292
Query: 360 aacgggttggtggtcgtccccacaaagatgatcactggtccca-tggggagcctgtgagg 418
||||||| ||||||||||||||||||||||||||||||| ||| || ||| |||||||||
Sbjct: 291 aacgggtcggtggtcgtccccacaaagatgatcactggt-ccagtgaggaccctgtgagg 233
Query: 419 aatcgcttcagctctgctctattacaggaaat 450
|| | |||||||||| | ||||||||||||||
Sbjct: 232 aagcacttcagctctaccctattacaggaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space: 370040
Effective search space used: 370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
