Query= MSMg01no363_b22.b1 MSMg01no363_b22.b1 CHROMAT_FILE:
MSMg01no363_b22.b1 PHD_FILE: MSMg01no363_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:44 2005
(471 letters)
>mm_chr1_167400841_167401715
Length = 875
Score = 857 bits (443), Expect = 0.0
Identities = 463/471 (98%), Gaps = 4/471 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaaaatgataccctaagattaattgcagtataaactactaccatgtgcaaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaaaatgataccctaagattaattgcagtataaactactaccatgtgcaaagt 264
Query: 65 cttgtgtttctagtgtcagcaacacacacacacaca--aagctaaaccagactcaccaat 122
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 cttgtgtttctagtgtcagcaacacacacacacacacaaagctaaaccagactcaccaat 324
Query: 123 atctaatgccaagctcacgaaaacagtttatgtcattcttaagtatcatgctgggtgagt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atctaatgccaagctcacgaaaacagtttatgtcattcttaagtatcatgctgggtgagt 384
Query: 183 tccagat--tctatactttgagttttctctggattacttaataaggcattaagttggata 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccagaaactctatactttgagttttctctggattacttaataaggcattaagttggata 444
Query: 241 gttgttgctgtactttgtttggggataacttcaagaaaaacatagatttgttcaatgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgttgctgtactttgtttggggataacttcaagaaaaacatagatttgttcaatgcag 504
Query: 301 atgaaaaagacttagtcctgaaatataaaccaatgaatctcctggatactagaattataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaaaaagacttagtcctgaaatataaaccaatgaatctcctggatactagaattataa 564
Query: 361 gaactgcaccactacatgtagcttccaactactgtcagtccacagttgggtggatctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaactgcaccactacatgtagcttccaactactgtcagtccacagttgggtggatctgaa 624
Query: 421 aatgatggaagctactgataaggagagcaaagtatattttttaaattgtgt 471
|||||||||||| ||||||||||||||| |||||||||||| |||||||||
Sbjct: 625 aatgatggaagccactgataaggagagcgaagtatatttttaaaattgtgt 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 875
Length adjustment: 10
Effective length of query: 461
Effective length of database: 865
Effective search space: 398765
Effective search space used: 398765
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_b22.g1 MSMg01no363_b22.g1 CHROMAT_FILE:
MSMg01no363_b22.g1 PHD_FILE: MSMg01no363_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:44 2005
(429 letters)
>mm_chr1_167455365_167456193
Length = 829
Score = 804 bits (416), Expect = 0.0
Identities = 425/428 (99%)
Strand = Plus / Minus
Query: 1 ttatgtagaccaggctgaccacaaactcacagacatccacctgtctctgcctcttgagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttatgtagaccaggctgaccacaaactcacagacatccacctgtctctgcctcttgagtg 513
Query: 61 ctggaactaaatctgcatgccatcatgtccagctctatgtgagttttaaaataagaataa 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 512 ctggaactaaatctgcatgccatcatgtccagctttatgtgagttttaaaataagaataa 453
Query: 121 ataattgagccctgggacgggggaagggaagagggaggaagcaaggagacatgtgtgatt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ataatcgagccctgggacgggggaagggaagagggaggaagcaaggagacatgtgtgatt 393
Query: 181 tctaacacatggttattttcctctctcttttgtaggagtatatatgtgcatgtgtggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctaacacatggttattttcctctctcttttgtaggagtatatatgtgcatgtgtggtat 333
Query: 241 ataggcgtacagatgtgggtgcacatgtgctcatgggtgtggaggctagaggctgacagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ataggcgtacagatgtgggtgcacatgtgctcatgggtgtggaggctagaggctgacagt 273
Query: 301 aggtatctctgagacaggatctcttactaaacccaggctcagtcactggctacacttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aggtatctctgagacaggatctcttactaaacccaggctcagtcactggctacacttccc 213
Query: 361 ggccagcaagcaccagggatccacctgtttccaccacacccgtgctagggttacagaagt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 agccagcaagcaccagggatccacctgtttccaccacacccgtgctagggttacagaagt 153
Query: 421 gtgcagtc 428
||||||||
Sbjct: 152 gtgcagtc 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
