CAAAAGGGTGCTTTCTTAATTGGGGCCCGGNNACACCCGCCCTGTTACAG
AACAGGGGGGGAGCGCTCTTATTTTCCCCCCACAAAAAGAGAGTTTATCC
AACTCTTCCCTCCCATATATTTTCTTCGCGGGGTCCAACTCCCCCAAAAA
AACAAATTCCCCCCTACCGGGCCCTCTTCTCCCTTTCCCCTATATTGGCC
TCGACTTCGCTACTTTTCTTTCTTTCCCCCCTCTGTCGGGGTTGTTAACT
AAAAAGAACACCCTCGACATCGCGAGCCCTTCTGTCCGGCCCACCCGGGG
GAAATTTTCCGTTTCGTTCTTTTTTCCCGTAACGATAACACTCCTTGAAA
ATCAACCGAAACAACCCCCTACCCTTCCTTAAAATTTTGTGTCGACACCC
CCAATAACTCTCTCGCTTCTTGTGTATTTATATCTGTGGGGGAGAACAAT
TTTTCGTGGGCGAGGTCCCCCTCGGCAGCAACCATTATCCGCCGGGTGGG
GGGAATTCTTCCTTCCACTATCACACCCCGCCCTAGGAATATGTCCTCCT
CTCTTATAGACTCGCCAAAAATACCGCGACCCTGTTCATACGTTTTTTCC
CTCACCACACAACCCTCTGCATGCCGTACACCACGCTATATCCTTTCCAT
GGCCCGTGCGCCTTTTGTTCTATAACTTATCCCTGGATTTACTTATCTCA
CACATTCACCCTCCTTTACTGCCGCCCTGCACGATATCACTGTTTCACAT
TACTTCTCGCACCCCTCGTTCTCTTTTATCCTGACTCAATTAACCGCTAT
TTCCATCCCACGCCCGCCCTATTCGCTCTTCTTT

NNNCCTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTAAAACCATCAAT
ATGAGTGGTATTAAAGTTAATATGTTTGCTTACCTGATGAGTCATCTGCT
TTGATACTTTTCCTATACACATTAACTAATGGCTATATTCAATTTAAGTT
TTTTTCAATGCATTTATTTTATATCTGTATCTGTTGTTCTTTCTTGCACA
AACTATAACTCCCTTTGGAAAGGGTCTTAATACCTTATTCCTCTCAGGGG
AGGGATATTGGAATTTGATTGGAAATTGATGGCTTCTATGGAAGGAAGAA
TTTATCTCCTTTTGACATGTGTTTGCAAAGGGCTAGCTACACACTCACAC
ATATATTGGCAATACTAATTGCTCCTAGAGGGTTATTAGCAGCAATAAAA
ATAAGGCATAAATTTGGAAAGAAGATATTATGGAAACACTAGAGGAAGTT
GGAGGGAAGTAGAATTGGCTACATGATCAAAATGTATTTAATAAATCATG
AAAAATTCTAAGAGAAAATAAAAATTTTATTAATGTTTAAAACTCCCCAC
TGTGGGACTGTGAAAGGTAACCTGCCTCCAGGTTGAGTTACCGCTAAAAA
CCCTGTAGCCCATGAAGGGATGATAAGGATTTTCCCTTGTTCCCAGGACC
AAATCCCCTGGCTCTAACTGGCGCCCCCCCTAGATTTGGTGCCTCCCCCC
GGGG

Query= MSMg01no363_d06.g1 MSMg01no363_d06.g1 CHROMAT_FILE:
MSMg01no363_d06.g1 PHD_FILE: MSMg01no363_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:50 2005
         (528 letters)



>mm_chr1_47801436_47802363
          Length = 928

 Score =  832 bits (430), Expect = 0.0
 Identities = 433/434 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctctaaaaccatcaatatgagtggtattaaagttaatatgtttgcttacctgatgagtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctctaaaaccatcaatatgagtggtattaaagttaatatgtttgcttacctgatgagtc 375

                                                                       
Query: 61  atctgctttgatacttttcctatacacattaactaatggctatattcaatttaagttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 atctgctttgatacttttcctatacacattaactaatggctatattcaatttaagttttt 315

                                                                       
Query: 121 ttcaatgcatttattttatatctgtatctgttgttctttcttgcacaaactataactccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttcaatgcatttattttatatctgtatctgttgttctttcttgcacaaactataactccc 255

                                                                       
Query: 181 tttggaaagggtcttaataccttattcctctcaggggagggatattggaatttgattgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttggaaagggtcttaataccttattcctctcaggggagggatattggaatttgattgga 195

                                                                       
Query: 241 aattgatggcttctatggaaggaagaatttatctccttttgacatgtgtttgcaaagggc 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 aattgatggcttctatgggaggaagaatttatctccttttgacatgtgtttgcaaagggc 135

                                                                       
Query: 301 tagctacacactcacacatatattggcaatactaattgctcctagagggttattagcagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tagctacacactcacacatatattggcaatactaattgctcctagagggttattagcagc 75

                                                                       
Query: 361 aataaaaataaggcataaatttggaaagaagatattatggaaacactagaggaagttgga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  aataaaaataaggcataaatttggaaagaagatattatggaaacactagaggaagttgga 15

                         
Query: 421 gggaagtagaattg 434
           ||||||||||||||
Sbjct: 14  gggaagtagaattg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space:   475524
Effective search space used:   475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)