NNTTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGGATCC
GCGGAATTCACAAAATTCTAAAAATAACCTTGGCATAGCTCCAAAGGACT
GGATATCCTACCCCAGAAATACTTGCTCAGCCAGGTTCATTGTTGCTCTA
TTTCAATAGCTAGGAAATAAAAACAACCTAAATGTCTTTCAGCCAACATA
TTGATAACAAAATGTGGTTCATATCCACTATGGAATATGATTCAACTTAT
TAAAAATGAAATAAGGATGTTTGCAGGTAAGTGTATTTCACAACTGATAA
ACCTATCTCAATGACATGTGATAACTTTTACATAAAAAAGTTCTATAACA
TAACATGAATAATCTTCTGTAAATACTTCAATTTCCGTGTTTCTTGGATT
CATGCTGTATAGTGGGTCTATTAGACTGCATAGTCCATGCCTTTCCCTTT
GAAGATTACCAACCTTTGCCAAAGGTATATTTCCCAATAAATCATCATCA
ACATCTTGAAAACTGCAAATAAAAACTTGATGGTAGACACAAGCAATACT
TTTGAGCCTGGAACTTTAGGGCTAGGGTCCCTGGAGAGAATTCTGTGCTT
CTTAGGGCTATTGTATCCCATGCTTGAACAAAGAGCTGAATGACCTGGAC
ATAAATGAAAGGAGAACCTGAAAACAAATGGGTCTATTCCAAGTACAGGC
TGGGCGTCCTTTGGGGAAAAGGTGGGGCCCCCCCGTAATAATGCCTCTCG
GTACTAGAA

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGCAGGAGTTGGGAGGGAGGGGGGCT
GGGGGCTGGAGAGGTAGTCGNTTCCGCCTCTTTTTTTTTTTCGTCGTTTT
TGTTCCTTTTTTCCTTTTTTTCCTTTTTTTTTTTTCTTTTCTTTCTTTTT
TTCCTCCCCCCCCCGCCCTCCTCCCTTTTTTTTCTTTTCCTTTTTTTCTC
CTCCCTCTTCTCTTCTTCTTCTTCCGTTTCCTTTTTTGTCTTCTCTTTTT
GTCCTTTTTTTCTCTCCCTTGTCTTTTTTTTTTTTTTCTTTTCTCTGTTC
TCCTCCTCTTCTTTCTTTTTCTCTCTTTTTTCTCTCCCTTTCTCGTTTGC
TTTCTCTTTTTTTTGTTTCTTTTTTTCTCCTCCTTTTCTCTTTGTCTTCC
CCTTCTCTTCTATCTCTTCCCCTTCTTCCTCTTTTATTCCCTCTTTCTTC
TTTTTCTTTCTTTTTTCTCTTTTCTTCTTTTTTTCCTTTTCGACTTCTTC
TTTCCTCTCTTCTTCTCTCTCTCTTTGTCTCTTTCTCCCGCTTTTTTTGT
CTTTTTCTCCTTCTTTTTTTCTTTCTTCGTTCTCCTCTTTTTCTCTCCCT
ATTCCTGTCTCTTGTTGTCTTCTTCTTTTTTTTTTTTCTTTCCCTCTTTC
TTCTCTTTTTCCTCCTGGTCTCTGTTTCTTCTTTTTATTCCCTTGCTTCT
TCCTCTTCCTCTCATCTTTCCTCTCCACGTTGCTCCTCCCTGTTTTTTAT
TCCTTTCTTTTTTCTCTTCCTCTTTTCCCATCTCTTCTCTTTTTCTTCCG
CCTGTCTCTCTTCCTTT

Query= MSMg01no364_b08.b1 MSMg01no364_b08.b1 CHROMAT_FILE:
MSMg01no364_b08.b1 PHD_FILE: MSMg01no364_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:03 2005
         (487 letters)



>mm_chr1_151871450_151872336
          Length = 887

 Score =  853 bits (441), Expect = 0.0
 Identities = 447/449 (99%), Gaps = 1/449 (0%)
 Strand = Plus / Minus

                                                                       
Query: 40  gctccaaaggactggatatcctaccccagaaatacttgctcagccaggttcattgttgct 99
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gctccaaaggactggatatcctaccccagaaatacttgctcagccaggttcattgttgct 828

                                                                       
Query: 100 ctatttcaatagctaggaaataaaaacaacctaaatgtctttcagccaacatattgataa 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ctatttcaatagctaggaaataaaaacaacctaaatgtctttcagccaacatattgataa 768

                                                                       
Query: 160 caaaatgtggttcatatccactatggaatatgattcaacttatt-aaaaatgaaataagg 218
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 767 caaaatgtggttcatatccactatggaatatgattcaacttattaaaaaatgaaataagg 708

                                                                       
Query: 219 atgtttgcaggtaagtgtatttcacaactgataaacctatctcaatgacatgtgataact 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 atgtttgcaggtaagtgtatttcacaactgataaacctatctcaatgacatgtgataact 648

                                                                       
Query: 279 tttacataaaaaagttctataacataacatgaataatcttctgtaaatacttcaatttcc 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tttacataaaaaagttctataacataacatgaataatcttctgtaaatacttcaatttcc 588

                                                                       
Query: 339 gtgtttcttggattcatgctgtatagtgggtctattagactgcatagtccatgcctttcc 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtgtttcttggattcatgctgtatagtgggtctattagactgcatagtccatgcctttcc 528

                                                                       
Query: 399 ctttgaagattaccaacctttgccaaaggtatatttcccaataaatcatcatcaacatct 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctttgaagattaccaacctttgccaaaggtatatttcccaataaatcatcatcaacatct 468

                                        
Query: 459 tgaaaactgcaaataaaaacttgatggta 487
           |||| ||||||||||||||||||||||||
Sbjct: 467 tgaacactgcaaataaaaacttgatggta 439


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)