NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTCCCCCACCTGATAGTCAATCAGCTTATGTGCCAAAAAACG
GGTCATCGGGCCCTCGGTCCCAGGGCCCTCAAAGATATGGGAACCGGTTT
GTCAGGACCCAGGAAGCAGTCAGAGAGGCGACCCAGGAAGACCCACAAGG
GTGGACCTGCGTGCCGCCTCCGACTTCCTATTAATGCCTCAAATGAGTAT
TCAGCCGGTGCCGGTGGAGCCTATACCATCCTTGCCCCCGGGAACCATGG
GCCTTATTCTCGGCCGGGGTTCACTCACCTTGCAGGGCTTAGTAGTCCAC
CCTGGAGTTATGGATTGTCAACATTCCCCTGAAATACAGGTCCTGTGCTC
AAGCCCTAAAGGCGTTTTTTCTATTAGTAAAGGAGATAGGATAGCTCAGC
TGCTGCTCCTCCCTGATAATACCAGGGAGAAATCTGCAGGACCTGAGATA
AAGAAAATGGGCTCCTCAGGAAATGATTCTGCCTATTTGGTTGTATCTTT
AAATGATAGACCTAAGCTCCGCCTTAAGATCAACGGAAAAGAGTTTGAAG
GCATCCTTGATACCGGAGCAGATAAAAGTATAATTTCTACACATTGGTGG
GCCAAAGCAGGGTCCACCCAGAGTCATCTCATTCATTTAAGGGCTTAGTT
TACAATCATGGCCCCCTATAAGATCCTTTTGCTTTGAGTGGGAAACCTCT
GAATGGTGGCAGGGGTATT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACTCTCCATTTTTAAATCCCAG
GAGGTCAGAAATGTATGAGGAAAAGGGAAAGGCCCTCATTTACTTATTGC
AAATGACAATGTATTTAGTACTTGAGTCTCTGTTTGCCACTTTGGATTTC
AAACAAACAGTGTAAGGATACTTAGGATATTTGCATCACATATTTTTTTG
TGAATACAGCAGTGATTACCAGGGCAGAGCAAGTATCTGTGGAGTAAGAT
AGTGAGTCCTTTTTCCATGTACCAATGAGTGGTACACATCTAGGTCATGT
GTTACTTTTTGAGAATTCTCCACATTGATTTCCATAGTTGTTGCGCTAGT
TTAAAATCTTGCTACTCTGAATGTATTTTCCCATTTCCCTGCAGGATTTC
CAATCAATTGCTTTGGTTATATTTGCTTTTAAGACTGAAGCAATATGACT
TCTGAAAATCTTTGGAGATTCTAGGGCTTTTGAATGGGTCATTGTTTATT
TCATTTATGATTTTATTATGTATTCTAGAAAATTAATCCTCTGCCAAACA
CAGAGCTGACAAAGATCCCCTCCTATTCAATAGAAATTCCTCTTTGCTTG
GTTTTGGTTAACCAAGTTGAAGCTATTTAGCTTTAATAATTCCCCTTTGC
CCACTGGGGCCCTTATTTCTTATGAAAAAGGGAGGGTTTCCTCGTGTAAT
CTTTCCCTACTCCG

Query= MSMg01no364_d07.g1 MSMg01no364_d07.g1 CHROMAT_FILE:
MSMg01no364_d07.g1 PHD_FILE: MSMg01no364_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:13 2005
         (481 letters)



>mm_chr1_118720646_118721526
          Length = 881

 Score =  926 bits (479), Expect = 0.0
 Identities = 479/479 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   actctccatttttaaatcccaggaggtcagaaatgtatgaggaaaagggaaaggccctca 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 actctccatttttaaatcccaggaggtcagaaatgtatgaggaaaagggaaaggccctca 262

                                                                       
Query: 63  tttacttattgcaaatgacaatgtatttagtacttgagtctctgtttgccactttggatt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttacttattgcaaatgacaatgtatttagtacttgagtctctgtttgccactttggatt 322

                                                                       
Query: 123 tcaaacaaacagtgtaaggatacttaggatatttgcatcacatatttttttgtgaataca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaaacaaacagtgtaaggatacttaggatatttgcatcacatatttttttgtgaataca 382

                                                                       
Query: 183 gcagtgattaccagggcagagcaagtatctgtggagtaagatagtgagtcctttttccat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcagtgattaccagggcagagcaagtatctgtggagtaagatagtgagtcctttttccat 442

                                                                       
Query: 243 gtaccaatgagtggtacacatctaggtcatgtgttactttttgagaattctccacattga 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtaccaatgagtggtacacatctaggtcatgtgttactttttgagaattctccacattga 502

                                                                       
Query: 303 tttccatagttgttgcgctagtttaaaatcttgctactctgaatgtattttcccatttcc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttccatagttgttgcgctagtttaaaatcttgctactctgaatgtattttcccatttcc 562

                                                                       
Query: 363 ctgcaggatttccaatcaattgctttggttatatttgcttttaagactgaagcaatatga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctgcaggatttccaatcaattgctttggttatatttgcttttaagactgaagcaatatga 622

                                                                      
Query: 423 cttctgaaaatctttggagattctagggcttttgaatgggtcattgtttatttcattta 481
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cttctgaaaatctttggagattctagggcttttgaatgggtcattgtttatttcattta 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)