XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTA
TTATTCTCTAAACCTAACTTTTTGATTGGATTGTTTGGTTTTGTGAAGGA
AAACTTCTTGAGATTTTTATATGTTTTAGATGCTAAGGAACACTACCTAA
CTCATTCTATGAAGCCACAATTACTCTGACACCTAAACCACACAAGGACC
CAACCAAAAAGAAGAACTTCAGACCAATCTTGCTTATGAATATTGATGCA
AAAATACTCAATAGAATTCTTGCAAACCAAATCTAAGAACATATCAAGAC
CATCATCCACCACAATCAAGTAGGCTTCATCCCAGAGATGCAAGGTTGGT
TTAATATGTGAAAATCCATTAACATAATTTACTATATAAAAAATCTCAAA
GAAAAAAATCATGTGATCATTTCCTTAGATGCAGAAAAAGCATTTGACAA
AATACAACACCCCTTCATGATAAAAGTGTTGGAAAGATCAGGAATTCAAG
TACCATACCTAAACCTAATTAATGTCACACTTTGTCAACTTATCGCCCAT
ATCCAATTAATTGAATAATTATTGGAAGCATTCCCACCGAAATCTGTGAA
CATAACAAGGATGGCCTCCTTCCCTAATTCATTTTACATTATACCCCTAA
GTGTTTTCTCTACATTTCTTTACCCTTCCCCTTACTCTTGTCTTTATTCC
TTTTTTCCCCCAACAACATTGTCTTCCCCTTTTCCAATCTTTTTTACCCT
TTATCTTCTTGTCCTCCCTACTTTTTCTCTTGAAACACTTTTTTTCCG

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTCATGGTTGAAGCTCACCTCGAGTACAG
ATTTAATTTTTTTTTTTGAGTAGGCATTGCAGGTGGAGGTAGGTAATCAG
ATTAATTTTTTCCAAGCACCATACTTAATATGTTCAACTAAGCATTAGAT
ACTCCCTAAATTCCCAATGAAGTCCAAACACTAGAGTTCCTGTTTATAGT
GGTTCAGCATTGCAATGTACAACAGTTTTCAGAGCTATTCCTCACATTGG
TCTTAATACCTGTACTCAGGTTTTACTGGGTTTTGTCCAGTCATGTCGGG
AATCAAGGTGGATAGTTTTTCAGCATTGTCTGTGTGGCAATATGTTCACC
TGCTGTATGTAAACAAGCAAGAAGGGAAATTATGCATTCACTTGTTCCCC
CAAGTATTATGTATCCCCCATATTTAAGAAGTGAGGAACAAAAAAATTAA
TTACTACCTTCACAAAAGCAGAAGAGAGCTACTGTTCTACCTGATCTAAA
ATAAAATTATTGACAACGTCCCAGTGAAGAGGCAGAAGACTGTCAGATAC
TTAAACAGGCCCCAGGAGGGCCGGAGTGGCTATGATCCCCAAGGGCTGAC
CGGTTCTTTTTAGGGGAATCCTCCGGGTGGAGCCTAAGAGAGCCTTAGTC
TTACCGGTGGGTTAAGGAAAAAAAATTTGGGGTCTGGGAACCCTTCCATT
TTCGG

Query= MSMg01no365_d22.g1 MSMg01no365_d22.g1 CHROMAT_FILE:
MSMg01no365_d22.g1 PHD_FILE: MSMg01no365_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:41 2005
         (451 letters)



>mm_chr1_196866078_196866926
          Length = 849

 Score =  830 bits (429), Expect = 0.0
 Identities = 445/451 (98%), Gaps = 2/451 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcatggttgaagctcacctcgagtacagatttaatttttttttttgagtaggcattgca 60
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 201 ttcatggttgaagctcacctcgagtacagatttaattttttttt--gagtaggcattgca 258

                                                                       
Query: 61  ggtggaggtaggtaatcagattaattttttccaagcaccatacttaatatgttcaactaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggtggaggtaggtaatcagattaattttttccaagcaccatacttaatatgttcaactaa 318

                                                                       
Query: 121 gcattagatactccctaaattcccaatgaagtccaaacactagagttcctgtttatagtg 180
           ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 319 gcattagatacgccctaaattcccaatgaactccaaacactagagttcctgtttatagtg 378

                                                                       
Query: 181 gttcagcattgcaatgtacaacagttttcagagctattcctcacattggtcttaatacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttcagcattgcaatgtacaacagttttcagagctattcctcacattggtcttaatacct 438

                                                                       
Query: 241 gtactcaggttttactgggttttgtccagtcatgtcgggaatcaaggtggatagtttttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtactcaggttttactgggttttgtccagtcatgtcgggaatcaaggtggatagtttttc 498

                                                                       
Query: 301 agcattgtctgtgtggcaatatgttcacctgctgtatgtaaacaagcaagaagggaaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcattgtctgtgtggcaatatgttcacctgctgtatgtaaacaagcaagaagggaaatt 558

                                                                       
Query: 361 atgcattcacttgttcccccaagtattatgtatcccccatatttaagaagtgaggaacaa 420
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 559 atgcattcacttgttccaccaagtattatatatcccccatatttaagaagtgaggaacaa 618

                                          
Query: 421 aaaaattaattactaccttcacaaaagcaga 451
           |||||||||||||||||||||||||||||||
Sbjct: 619 aaaaattaattactaccttcacaaaagcaga 649


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 849
Length adjustment: 10
Effective length of query: 441
Effective length of database: 839
Effective search space:   369999
Effective search space used:   369999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)