NNNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCATGAATTCTTCGTTTTAATAGCTGAGTAGTACTCCATTG
TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATATG
GGTTATTTATAACTTGAGGGTATTATAAATAAGGCTTCTATGAACATATA
GGATCATGTGTCCTTGTTATATGTCAGAACATCTTTTGGTATATGGCCAG
AAGAGATATAGCTGGGTTCTCAGTTAGAAGTATTTCAAATTTTCTCAGTA
ACTGCCAGACAGATTTCCAGGGTGGTTGTACAAGCTTGTATTCCCACCAG
CAATGGAGGAGTGTTCATCTTTCTCCACATCCTCACCAGCATCTGCTGTT
GCCTGAGTTTTCTATCTTAGCCATTCTGACTGGTGTAAAGTGGAAACTCA
GGGTCATTATGATTTGAATTTCCATGATGAGTAAGGATGTTGAACATTTC
TTTAGGTGCTCCTTAGCCATTCAATATTCCTCAGTTGAAAACTCTTTGCT
TAGCTCTGTACCACATTTTTAATGAGGTCATTTGATTCCTTGGAGNCTAT
CTTCTTGAGTTCTTTGATATTTTGGAAATTAACTCTGTAATGGAGGTAGA
TTGGAAACCTCTTTTACAACACCTGGTTGAATTTTGGTTTATGCCCTGTC
AGGGACCCCAATTTCCCCCGGGAACCCAAACTGGAAAAAATTCTCCAAGG
GGTGGGAAAAAAAAA

NCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAAACAGCAAGATCATTAATGTGCAA
AAATCATGGGACAGGGTTGAGAGGTAATCAGATTAGCATAGAAAGTAAAG
GTAGATCATTTGCTTGCTCAGCTATTGATGTGCAGTTTTAAATAAATCTT
GGTTTCTCTGTGTGCTTTGTTGGCGACTAACAAAAGGGAAAGAAATGCTG
CTAATGGATTAAATTACTGCTACATTTATATTAAAGAAAAGTCACTTATA
TATTGTGCCCAACCAAAAGGTATGTTATCCATACTCTTAAAACTCATTTT
CAGGCCTTAAAACAGAAAGTTCCAGAAGGAAAGTGAAAAGTGACAGTCCC
AAGGACCCAAAACAGTTTCACAAGGAAAGTCTCTCTGAGATTTTCCCAAA
AGGAGTGGCAGAGGTCATGGATCCCATAAAACAAACAAACAAACAAACAA
ACAAACAAACAAAATACAAAAACAAAACTTGGACCTGAGCAAACCAAGGG
AGTAGTATTTGAAGTTAGTCCAGAGAAAGGAGGCCCAGGAAATTTCAAAT
CACCAGTCTGTGGCCATTGAAGGGAGAGTCAAACACTAGATAGCAAGGAA
CACTTCTGTTCCTCCTATTTACAAAGGAAGGGTACTTAAATTTCTTGCGG
TTTTTCAGGCATTGTCTCACTCGGGAAAGCCTTAAGAAACTGAATGGATT
GTTTTTTTTGGCCACAGGCTATTTCC

Query= MSMg01no366_k21.g1 MSMg01no366_k21.g1 CHROMAT_FILE:
MSMg01no366_k21.g1 PHD_FILE: MSMg01no366_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:36 2005
         (512 letters)



>mm_chr1_114193184_114194095
          Length = 912

 Score =  748 bits (387), Expect = 0.0
 Identities = 474/515 (92%), Gaps = 23/515 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaacagcaagatcattaatgtgcaaaaatcatgggacagggttgagaggtaatcagatt 60
           |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 807 caaacaacaagatcattaatgtgcaaaaatcatgggacagggttgggaggtaaccagatt 748

                                                                       
Query: 61  agcatagaaagtaaaggtagatcatttgcttgctcagctattgatgtgcagttttaaata 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 747 agcatagaaagtaaaggtagatcatttacttgctcagctattgatgtgcagttttaagta 688

                                                                       
Query: 121 aatcttggtttctctgtgtgctttgttggcgactaacaaaagggaaagaaatgctgctaa 180
           ||| ||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||
Sbjct: 687 aattttggtttctctgtgtgctttgttggggactaacaaaagggaaaggaatgatgctaa 628

                                                                       
Query: 181 tggattaaattactgctacatttatattaaagaaaagtcacttatatattgtgcccaacc 240
           |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 627 tggattaaattactgctatatttatattaaagaaaagttacttatatattgtgcccaacc 568

                                                                       
Query: 241 aaaaggtatgttatccatactcttaaaactcattttcaggccttaaaacagaaagttcca 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 567 aaaaggtatgttatccatactcttaaaactcattttcagaccttaaaacagaaagttcca 508

                                                                       
Query: 301 gaaggaaagtgaaaagtgacagtcccaaggacccaaaacagtttcacaaggaaagtctct 360
           |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||
Sbjct: 507 gaaggaaagtgaaaagtgacagtcccaaggacccaaaacattttcacaagggcagtctct 448

                                                                       
Query: 361 ctgagattttcccaaaaggagtgg-----cagaggtcatgga-tcccataaaacaaacaa 414
           ||||||||||||| ||||||||||     ||||||||| ||| ||||| ||||       
Sbjct: 447 ctgagattttccccaaaggagtggagtggcagaggtca-ggaatccca-aaaa------- 397

                                                                       
Query: 415 acaaacaaacaaacaaacaaacaaaatacaaaaacaaaacttggacctgagcaaaccaag 474
                   | |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 396 --------ataaacaaacaaacaaaatacaaaaacaaaacttgggcctgagcaaaccaag 345

                                              
Query: 475 ggagtagtatttgaagttagtccagagaaaggagg 509
           |||||||||||||||||||||||||||||||||||
Sbjct: 344 ggagtagtatttgaagttagtccagagaaaggagg 310


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space:   452804
Effective search space used:   452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)