Query= MSMg01no368_e06.b1 MSMg01no368_e06.b1 CHROMAT_FILE:
MSMg01no368_e06.b1 PHD_FILE: MSMg01no368_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:40 2005
(530 letters)
>mm_chr1_132347806_132348735
Length = 930
Score = 938 bits (485), Expect = 0.0
Identities = 509/517 (98%)
Strand = Plus / Plus
Query: 4 ggaattctccagtggtgactgcagatcggtctcattttttctttttctttctgagcattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccagtggtgactgcagatcggtctcattttttctttttctttctgagcattt 263
Query: 64 tgttgatattaatattaatctattcaacaagggaccagaagcaggtggtcattctaaggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttgatattaatattaatctattcaacaagggaccagaagcaggtggtcattctaaggt 323
Query: 124 caggtgtctacgggttctggcattgattattcaataaagaagaactcatctgtgcacagt 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caggtgtctaagggttctggcattgattattcaataaagaagaactcatctgtgcacagt 383
Query: 184 gccttgggcacatggaaagtaattcagttttctatataccaagttcagagtgagcaccaa 243
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccttgggcacatcaaaagtaattcagttttctatataccaagttcagagtgagcaccaa 443
Query: 244 gtagtgtttgcactcaggatctggctcaatatcactgtagatagtgtgataaggaaggac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtagtgtttgcactcaggatctggctcaatatcactgtagatagtgtgataaggaaggac 503
Query: 304 agcagcacacaggtcctaggacaacaggccaggcctgcagctatcaactgctctgctaga 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 agcagcacacaggtcctaggacaacaggccaggcctgcagctatcaactgctctgccaga 563
Query: 364 accttccatgcatgccgaatcttccagggcttggtggggaaggtgacttggtttctggtc 423
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 accttccatgcatcccgaatcttccagggcttggtggggaaggtgacttggtttctggtc 623
Query: 424 tcagctgctggggtgaggcaatacccacctgagtgatggatcctgtgctctgggtggtct 483
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 tcagctgctggggtgaggcaatacccacctgagtgatggaccctgtgctctgggtggtct 683
Query: 484 tttaccttaaagctgtgctacagacagtgagaagaat 520
||| |||||||||| ||||||||||||||||||||||
Sbjct: 684 tttcccttaaagctctgctacagacagtgagaagaat 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_e06.g1 MSMg01no368_e06.g1 CHROMAT_FILE:
MSMg01no368_e06.g1 PHD_FILE: MSMg01no368_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:40 2005
(490 letters)
>mm_chr1_132527729_132528618
Length = 890
Score = 797 bits (412), Expect = 0.0
Identities = 438/447 (97%), Gaps = 2/447 (0%)
Strand = Plus / Minus
Query: 1 acagcctgaatcactgcttgtgagatcagatttaatacagggattgttataagttgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acagcctgaatcactgcttgtgagatcagatttaatacagggattgttataagttgttta 387
Query: 61 aattgtaaaaacctaatcaattttgcatattctgagctagagctgactgggtgtattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aattgtaaaaacctaatcaattttgcatattctgagctagagctgactgggtgtattttt 327
Query: 121 tgttcttcaacaaaatggcaaagactacaagacaggaaaagcttctacaagacagaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgttcttcaacaaaatggcaaagactacaagacaggaaaagcttctacaagacagaaaaa 267
Query: 181 gcttctatacccagctaaccttgctgcactctccactgccttaagcttttctgcagtacc 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 266 gcttctatacccagctaaccttgctgcactctccacggccttaagcttttctgcagtacc 207
Query: 241 acagtatgaagtggaaatctt-gggggtttttggagatcagttgtgtcgagtagtgtttt 299
|||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||
Sbjct: 206 acagtatgaagtggaaat-ttggggggtttttggagatcagttgtgtcgagtaatgtttt 148
Query: 300 acttgaaactgtcttatgagaggatgttttgctgaagcagatacatgcgaggatatttcg 359
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 147 acttgaaactgtcttacgagaggatgttttgctgaagcagatacatgcgaggttatttcg 88
Query: 360 atgagaaaaggcatggtgtttttctggaagccgcctggaaaaagggaatgtgatgttttg 419
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atgggaaaagacatggtgtttttctggaagccgcctggaaaaagggaatgtgatgttttg 28
Query: 420 ctanagctgaaacttgagagaacatgt 446
||| |||||||||||||||||||||||
Sbjct: 27 ctagagctgaaacttgagagaacatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
