Query= MSMg01no369_b24.b1 MSMg01no369_b24.b1 CHROMAT_FILE:
MSMg01no369_b24.b1 PHD_FILE: MSMg01no369_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:46 2005
(400 letters)
>mm_chr1_185764502_185765301
Length = 800
Score = 766 bits (396), Expect = 0.0
Identities = 396/396 (100%)
Strand = Plus / Minus
Query: 5 gaattcccatcacttcatggggagtcactaaggcaacttatgctgttgtatgcctggcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaattcccatcacttcatggggagtcactaaggcaacttatgctgttgtatgcctggcct 541
Query: 65 ggtgacaacattcctgagttttgctttagggtccctatatatgataggcttactcccggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ggtgacaacattcctgagttttgctttagggtccctatatatgataggcttactcccggt 481
Query: 125 gtggttgacatttaaggaaaagctttatcctaagaggggcaatgctcttggtcttcttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gtggttgacatttaaggaaaagctttatcctaagaggggcaatgctcttggtcttcttaa 421
Query: 185 agtcctatgcccaggatctcagcaagtcttttgtagattaaattaaatggactgaattgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agtcctatgcccaggatctcagcaagtcttttgtagattaaattaaatggactgaattgg 361
Query: 245 tgtagcatcagccaggttccaattaaagtcatagctgtctgctgagaaacagcctcggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgtagcatcagccaggttccaattaaagtcatagctgtctgctgagaaacagcctcggct 301
Query: 305 ctggggagagatgctgactcatataatgatagttctctagggccagtgggcattttcaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctggggagagatgctgactcatataatgatagttctctagggccagtgggcattttcaat 241
Query: 365 ccttttaaggattagtttcaccaaccagttttagaa 400
||||||||||||||||||||||||||||||||||||
Sbjct: 240 ccttttaaggattagtttcaccaaccagttttagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_b24.g1 MSMg01no369_b24.g1 CHROMAT_FILE:
MSMg01no369_b24.g1 PHD_FILE: MSMg01no369_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:46 2005
(473 letters)
>mm_chr1_185568697_185569569
Length = 873
Score = 789 bits (408), Expect = 0.0
Identities = 451/474 (95%), Gaps = 16/474 (3%)
Strand = Plus / Plus
Query: 1 aaatgtgtgagagggaggggaaaggcccaagatctttccagaaggacatcaaattatgta 60
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 aaatgtgagagagggaggggaaaggcccaagatctttccagaaggacatgaaattatgta 260
Query: 61 gctggtgagctagattcctcagcgcccttgtgtggttcattaggcagctcagccagtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctggtgagctagattcctcagcgcccttgtgtggttcattaggcagctcagccagtaga 320
Query: 121 ctcacatgggggttcattaagagcagatctttacatatggacaatgtgcaggaagtggaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ctcacatgggggttcattaagagcagatctttacatatagacaatgtgcaggaagtggaa 380
Query: 181 gacttggaagtactgggctccaaatgaaatgtcttcatcaggacctcaaggcccagggat 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gacttggaagtactgggctccaaatggaatgtcttcatcaggacctcaaggcccagggat 440
Query: 241 ctatg-gagaagaagaatcggaaagattataggagccagaggtggtggatgacgccaagg 299
||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ctatgtg-gaagaagaatcggaaagattataggagccagaggaggtggatgacgccaagg 499
Query: 300 aaacatgtcttccagatacagcggggctgatacgcatgtgaactcacagagcctggggca 359
||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 500 aaacatgtcttccagatac--------------gcatgtgaactcacagagcctggggca 545
Query: 360 gcatgcacaggacctgctcaggcaggttcaaagcagaccaaatcccagcacagagaaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcatgcacaggacctgctcaggcaggttcaaagcagaccaaatcccagcacagagaaggg 605
Query: 420 gaggtgaccacaaagtcccacccctaaccaagaagctttttgtgattgacacct 473
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 606 gaggtgaccacaatgtcccacccttaaccaagaagctttttgtgattgacacct 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
