Query= MSMg01no369_c22.b1 MSMg01no369_c22.b1 CHROMAT_FILE:
MSMg01no369_c22.b1 PHD_FILE: MSMg01no369_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:50 2005
(391 letters)
>mm_chr1_56819874_56820665
Length = 792
Score = 727 bits (376), Expect = 0.0
Identities = 385/388 (99%), Gaps = 1/388 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaa-cctgtgtcagatcacagtctggttctgacatttgtcttctctcattaca 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaaacctgtgtcagatcacagtctggttctgacatttgtcttctctcattaca 264
Query: 64 ctacctttgctctttgtcatgtgtgataataagaatcatgaaaggtcagaagtggcctgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacctttgctctttgtcatgtgtgataataagaatcatgaaaggtcagaagtggcctgg 324
Query: 124 gagatgttgtatcctaacagctgttctgagtttaatgtttctttgtaggtgtagaagcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagatgttgtatcctaacagctgttctgagtttaatgtttctttgtaggtgtagaagcca 384
Query: 184 ggggctagcatttccagaattttctctgttagcccattcttttgtcttctaatgttcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggggctagcatttccagaattttctctgttagcccattcttttgtcttctaatgttcctg 444
Query: 244 gaatttcctaggaatgcctgagtgctatctgtgtcttacaggccctgatgtaaaggctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatttcctaggaatgcctgagtgctatctgtgtcttacaggccctgatgtaaaggctgt 504
Query: 304 tgctgtattaatggcccatgatggcagtaagctatagaatagattaaatcatgtataagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgctgtattaatggcccatgatggcagtaagctatagaatagattaaatcatgtataagt 564
Query: 364 ctataattcagagccaaccaggttgttt 391
|||||||||||| | |||||||||||||
Sbjct: 565 ctataattcagaacaaaccaggttgttt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 792
Length adjustment: 9
Effective length of query: 382
Effective length of database: 783
Effective search space: 299106
Effective search space used: 299106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_c22.g1 MSMg01no369_c22.g1 CHROMAT_FILE:
MSMg01no369_c22.g1 PHD_FILE: MSMg01no369_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:50 2005
(413 letters)
>mm_chr1_56994657_56995469
Length = 813
Score = 758 bits (392), Expect = 0.0
Identities = 403/410 (98%), Gaps = 6/410 (1%)
Strand = Plus / Minus
Query: 1 actgtgtagtagacggttgggggagtccccatgttccccatctggtattaaggctttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 actgtgtagtagacggttgggggagtccccatgttccccatctggtattaaggctttggc 486
Query: 61 ttctggagacaaagtacttcaacagtacaaaattgaaagttttaagtaggttttgagggc 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttctggagacaaagtacttcaccagtacaaaattgaaagttttaagtaggttttgagggc 426
Query: 121 taaaaatgaaatgatatggacaacgcaaagattaaagttcttttttctgaataaaatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 taaaaatgaaatgatatggacaacgcaaagattaaagttcttttttctgaataaaatatg 366
Query: 181 ttacctttgtgggctaacttctgttggaaatcagataaatgttgcattgttaaaattagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttacctttgtgggctaacttctgttggaaatcagataaatgttgcattgttaaaattagt 306
Query: 241 tgatgttaagctatggcttagttcttatgaaaacattaacataataaggcttgttagtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgatgttaagctatggcttagttcttatgaaaacattaacataataaggcttgttagtaa 246
Query: 301 tatatgtatattatacatacatatacatgcacgtaggtatgtacatgtgtgcttgtgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 245 tatatgtatattatacatacatatacatgcacgtaggtatgtacatgtgtgct------t 192
Query: 361 gtgtgtgtgtgtgtgtgtgtgtatgaatatgttttggtctttcagtgagc 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtgtgtgtgtgtgtgtgtgtgtatgaatatgttttggtctttcagtgagc 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
