Query= MSMg01no369_j16.b1 MSMg01no369_j16.b1 CHROMAT_FILE:
MSMg01no369_j16.b1 PHD_FILE: MSMg01no369_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:23 2005
(443 letters)
>mm_chr1_102145888_102146730
Length = 843
Score = 748 bits (387), Expect = 0.0
Identities = 426/439 (97%)
Strand = Plus / Plus
Query: 5 gaattcacttttccagggtgcacagaaaagacataatattctgttctttctgaggccagc 64
|||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 205 gaattcacatttccagggtgcacagaaaagccataatattctgtcctttctgaggccagc 264
Query: 65 tagcctatggcatatgcagtggaaaaatagcaaggggttctgaataaaacaagggacaaa 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagcctatggaatatgcagtggaaaaatagcaaggggttctgaataaaacaagggacaaa 324
Query: 125 ttgctaacagacatctcaggttatcctctaaccatcatgtgcacacatggacttaccatt 184
||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||
Sbjct: 325 ttgctaacagacatctcgggttatcctctgaccatcatgtacacacatggacttactgtt 384
Query: 185 ctagccagattttgtcaatatgtcacaatctagaatcatcttagaagatgaaacctcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctagccagattttgtcaatatgtcacaatctagaatcatcttagaagatgaaacctcagg 444
Query: 245 tgatacaatgtctctgtgatattggcctacaggtaatcctataaggccaattctaatgat 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 tgatacaatgtctctgtgatattggcctacaggtaatcctataaggccatttctaatgat 504
Query: 305 ggaagtgggcagtcaatagtgggtggtgctatctaatggcaggttttattctatgggata 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaagtgggcagtcaattgtgggtggtgctatctaatggcaggttttattctatgggata 564
Query: 365 gtaaggcagccagaataagccacggggagggagcctgcaagccatactccttcatggcct 424
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 gtaaggtagccagaataagccacgaggagggagcctgcaagccatactccttcatggcct 624
Query: 425 ctgcatctgttcttgaaac 443
|||||||||||||||||||
Sbjct: 625 ctgcatctgttcttgaaac 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_j16.g1 MSMg01no369_j16.g1 CHROMAT_FILE:
MSMg01no369_j16.g1 PHD_FILE: MSMg01no369_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:23 2005
(338 letters)
>mm_chr1_102290864_102291600
Length = 737
Score = 325 bits (168), Expect = 2e-93
Identities = 186/192 (96%), Gaps = 1/192 (0%)
Strand = Plus / Minus
Query: 1 ttcgtaatccctcaaggaatcctttaagttctgcaaataaagtctttacagaaagaaata 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttcgtaattcctcaaggaatcctttaagttctgcaaataaagtctttacagaaagaaata 332
Query: 61 gtcattgaagacaatagaagaaggaaataaagaattgcaaaatctaagacttacaaagaa 120
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtcatggaagacaatagaaggaggaaataaagaattgcaaaatctaagacttacaaagaa 272
Query: 121 actcaatgcttgccagttattattttttctcacaccttttagaattattatagtttcctt 180
|||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 271 actcaatgcttgccagttattattttgtctcacaccttttagaat-attatagtttcctc 213
Query: 181 agtcaatagtca 192
||||||||||||
Sbjct: 212 agtcaatagtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 737
Length adjustment: 9
Effective length of query: 329
Effective length of database: 728
Effective search space: 239512
Effective search space used: 239512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
