Query= MSMg01no369_n05.b1 MSMg01no369_n05.b1 CHROMAT_FILE:
MSMg01no369_n05.b1 PHD_FILE: MSMg01no369_n05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
(128 letters)
>mm_chr1_146451769_146452295
Length = 527
Score = 199 bits (103), Expect = 4e-56
Identities = 121/127 (95%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 1 gaaaacatggcatagcatggatgatgactttttgaaagctggatatctctggttttccct 60
||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gaaaacatgccatagcacggatgatgactttttgaaagctgtatatctctggttttccct 260
Query: 61 aaaaaccttggaggtggttccactaaaatattctctctaacataataatatctgaatttt 120
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaccttgtaggtggttcccctaaaatattctctctaacataataatatctgaatttt 320
Query: 121 taagggt 127
|| ||||
Sbjct: 321 ta-gggt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 527
Length adjustment: 8
Effective length of query: 120
Effective length of database: 519
Effective search space: 62280
Effective search space used: 62280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_n05.g1 MSMg01no369_n05.g1 CHROMAT_FILE:
MSMg01no369_n05.g1 PHD_FILE: MSMg01no369_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:40 2005
(344 letters)
>mm_chr1_146621163_146621905
Length = 743
Score = 611 bits (316), Expect = e-179
Identities = 337/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 cttgggagggtagtttccttattctgtaattgatgattaaggaaaaaagaaataagaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cttgggagggtagtttccttattctgtaattgatgattaaggaaaaaagaaataagaatc 458
Query: 61 tatatgctactgaaaattacataatgacatgaacattgttcaatattttattcctgaaca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 457 tatatgctactgaaaattacatagtgacatgaacattgttcaatattttattcctgaaca 398
Query: 121 ctgagaatagtcctacaactcaaccacattcataactcaagtcaaattaccagaagcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctgagaatagtcctacaactcaaccacattcataactcaagtcaaattaccagaagcatg 338
Query: 181 aaaattgttctcttaaaattagtagatctgtccattataaatgatatactttattgccaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 337 aaaattgttctcttaaaattagtagatctgtccattataaatgatatactttatagccaa 278
Query: 241 taaattgtattatatgctactttgttaaatattgtaaatttatcttataaataggttatg 300
||||||| || | |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 277 taaattg-atgaaatgctactttgttaaatattgtaaatttatcttaaaaacaggttatg 219
Query: 301 tatcactctcctcaaaagtttttttttttaaatattttatggat 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tatcactctcctcaaaagtttttttttttaaatattttatggat 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 743
Length adjustment: 9
Effective length of query: 335
Effective length of database: 734
Effective search space: 245890
Effective search space used: 245890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
