Query= MSMg01no369_o21.b1 MSMg01no369_o21.b1 CHROMAT_FILE:
MSMg01no369_o21.b1 PHD_FILE: MSMg01no369_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:48 2005
(396 letters)
>mm_chr1_21523863_21524657
Length = 795
Score = 710 bits (367), Expect = 0.0
Identities = 385/391 (98%), Gaps = 1/391 (0%)
Strand = Plus / Plus
Query: 5 gaattcagaatgaacaagaccccttcatagtgagggtggggtggggtcaaatgttcaatg 64
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaatgaaaaagaccccttcat-gtgagggtggggtggggtcaaatgttcaatg 263
Query: 65 acttgatctatgggattgtcagctgctgcctacttttctccatacctttccaaaaagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acttgatctatgggattgtcagctgctgcctacttttctccatacctttccaaaaagaaa 323
Query: 125 agacgcatatctttgtagatgagagaagttggtgttagcagtgcttgcagagtaggcaac 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 324 agacgcatatctttgtagatgagagaggttggtgttagcagtgcttgcagagggggcaac 383
Query: 185 tctacccctggaaagcactggactgctctcatcatagggagcagggttaaggggtgagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctacccctggaaagcactggactgctctcatcatagggagcagggttaaggggtgagat 443
Query: 245 caaggatcaacaattcctaactccccaaacaagagggtaaactatcctgtaaattaaacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaggatcaacaattcctaactccccaaacaagagggtaaactatcctgtaaattaaacc 503
Query: 305 tgactttctgagcttggaaataattggagtaaactttactcaagaacttccagcgttttg 364
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgactttctcagcttggaaataattggagtaaactttactcaagaacttccagcgttttg 563
Query: 365 gatctgaatgtttgcccagcaagtgagaagg 395
|||||||||||||||||||||||||||||||
Sbjct: 564 gatctgaatgtttgcccagcaagtgagaagg 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 795
Length adjustment: 9
Effective length of query: 387
Effective length of database: 786
Effective search space: 304182
Effective search space used: 304182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_o21.g1 MSMg01no369_o21.g1 CHROMAT_FILE:
MSMg01no369_o21.g1 PHD_FILE: MSMg01no369_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:48 2005
(302 letters)
>mm_chr1_21683571_21684272
Length = 702
Score = 576 bits (298), Expect = e-169
Identities = 301/302 (99%)
Strand = Plus / Minus
Query: 1 tgggaaggccgagcaactgggacacgagttggagagcagacataaaactcctgcagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgggaaggccgagcaactgggacacgagttggagagcagacataaaactcctgcagactt 443
Query: 61 ctctctctcagccgtgtttggtgtggatgtatcagcatgctgtgcctaacaatgtgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctctctctcagccgtgtttggtgtggatgtatcagcatgctgtgcctaacaatgtgaaaa 383
Query: 121 gcctagactcttctccattgtaaagtctatctatcagaatggggaaaggatgggatagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gcctagactcttctccattgtaaagtctatctatcagaatggggaaaggatgggatagtg 323
Query: 181 catcaagttagtgggtatcaggaactggctaggaacctggctggagagaataagaaacat 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catcaagttagcgggtatcaggaactggctaggaacctggctggagagaataagaaacat 263
Query: 241 ccagcatttaaaagacatattttgtaaaagaacctgacagaaaatcttggcatttaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagcatttaaaagacatattttgtaaaagaacctgacagaaaatcttggcatttaccct 203
Query: 301 gc 302
||
Sbjct: 202 gc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
