Query= MSMg01no370_g15.b1 MSMg01no370_g15.b1 CHROMAT_FILE:
MSMg01no370_g15.b1 PHD_FILE: MSMg01no370_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:28 2005
(463 letters)
>mm_chr1_163898366_163899230
Length = 865
Score = 816 bits (422), Expect = 0.0
Identities = 458/486 (94%), Gaps = 27/486 (5%)
Strand = Plus / Plus
Query: 5 gaattcaaagcccagatagtgtgaatatgaataaatgggttcatgctttctgcctctgtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagcccagatagtgtgaatatgaataaatgggttcatgctttctgcctctgtg 264
Query: 65 tccacactatttaacagtctctatattttaaattcttcgagcttccatctatttataaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccacactatttaacagtctctatattttaaattcttcgagcttccatctatttataaat 324
Query: 125 cctgtgacacttccaagaccccagttgaaaatcagcaatctctcgtcccaaaggccctcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 cctgtgacacttccaagaccccagttgaaaatcagcaatctctcgtcccaaaggctctcc 384
Query: 185 accctcatctcttttaggtggcaaagtctaggaaaggatccagctttggagccatccaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accctcatctcttttaggtggcaaagtctaggaaaggatccagctttggagccatccaca 444
Query: 245 tttggatatttctgatctacttgcaattactaaccagctgcctgactttggtcaaaaaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttggatatttctgatctacttgcaattactaaccagctgcctgactttggtcaaaaaca 504
Query: 305 aactaatgatcgcatcgtctctgtgcaagtcaacgcacaggatgctatgtgagatctggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactaatgatcgcatcgtctctgtgcaagtcaacgcacaggatgctatgtgagatctggg 564
Query: 365 atctccccg-c-cccccccccttttttttttt-------------------------ggt 397
||||||||| | |||||||||||||||||||| |||
Sbjct: 565 atctccccgactcccccccccttttttttttttttttttttttttttttttttttttggt 624
Query: 398 gaataccagaagcctggtttggcacctataggaggagggtttggatgcatggaaagtccc 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaataccagaagcctggtttggcacctataggaggagggtttggatgcatggaaagtccc 684
Query: 458 ttggct 463
||||||
Sbjct: 685 ttggct 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 865
Length adjustment: 10
Effective length of query: 453
Effective length of database: 855
Effective search space: 387315
Effective search space used: 387315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_g15.g1 MSMg01no370_g15.g1 CHROMAT_FILE:
MSMg01no370_g15.g1 PHD_FILE: MSMg01no370_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:28 2005
(420 letters)
>mm_chr1_164011423_164012242
Length = 820
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%)
Strand = Plus / Minus
Query: 1 ttggcagaggcagagcaaatgccaagccaaccacatcgccacagaggagcagcgaggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttggcagaggcagagcaaatgccaagccaaccacatcgccacagaggagcagcgaggtgg 561
Query: 61 gagcttgtgcttaggcactctgaagaaagcacgcagtagccgctggcttacaagaggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gagcttgtgcttaggcactctgaagaaagcacgcagtagccgctggcttacaagaggatg 501
Query: 121 ctcagggaccagatgatatagccctaaagtaatggtgaacagcttggatgtcacactaag 180
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 500 ctcagggaccagacgatatagccctaaagtaatggtgaacagcttggatgtcactccaag 441
Query: 181 atgagaagccatgagagggtatcagtcccaatgatgacacagcatatgacaatatgctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgagaagccatgagagggtatcagtcccaatgatgacacagcatatgacaatatgctct 381
Query: 241 gtaagagactggtggggctgggtgtgatgagaagcagggcatgctattcaagcacaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtaagagactggtggggctgggtgtgatgagaagcagggcatgctattcaagcacaggca 321
Query: 301 ctaaatgtcaaaccacctctgtgtaaatttcacaaactcataaaccttgagtttgggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctaaatgtcaaaccacctctgtgtaaatttcacaaactcataaaccttgagtttgggaga 261
Query: 361 gtacctggcctatttatcttctccaagcttcatttctaaatgaaatggctgtaagtcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtacctggcctatttatcttctccaagcttcatttctaaatgaaatggctgtaagtcccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
