NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTACCCGAGTGGATCCTGGCTTGGC
ATCAGGAAAGAATGGGCTGGGATAGGTGCCCTCACTGTGACCCTTGTTTT
GGCATGCATGTTGTGTGTATGGTGTATGTGTCAGTTGCGGAATGCCAAGT
TCCGCACTGCCGCCATGGTGGTGCAAGCTTTTGCCACAGTGGAAGCAGGG
CAGTCACCTCAGATTTGGCTTGTTGTCATGAAGAGTGAACAATGAAGCCA
TCACTCCACAGGGTTGTAAGGCTAAGCACTGCACAGAGGTTAGTCTGGAA
GCTGTTTGGCGATCTCTGGGAGGTATGTCTGATTGCATGAGGGTTGAGTG
TCCTAGTGTCCTTCCCCCAGGAAAAAAATGGCTTGGGAGCAGGTCAGGGT
CGCTCTGGGTAAAAACCTGTGAGCCTAAGAGTCAATCCTGTACATGGCCC
CTATTTCTGCACACTGGGGATCAAACCTCTATTCTCACCCACGGAGCTTG
CTTTCAAAAATATAAAAAGTGAACTTGTTGNAAAGTCTTTCCTGATCTCT
TGGTCAACGGTACAAAATCCTGTGCCCCTCATTAAAATAACCCCTATTTG
TTGGAATGCTCTCCCCTTATTTCCTTAATTGGTTCACAAATTCTTACTGT
TTTAGATACATTACTCATCCTTCAATTATTTAAACTATTCCTTACTCACA
CTAATAACATTTAACCTCTTAAT

TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGA
ATTCCCTTTCAGTGACCATACCCCACGAAAACTTATCTTATACCTCTGCC
CCAGAATCCAGAAATTGCCAATTGTTCCTGCACTAGGGAAGGACTTTGTG
CCCACCTCCTGCCTTCATGGTACAGTCCTAGTTGGTTTGATATTATACAG
GGCGTGTCATTGCAGTCACAACCAGAACCACTGGAGTTTATGTGTTTGGC
AGCTCTGTCATGTTTGACAAATAATTTTTCTGTTCACATATTTACTACCT
GTCTTAGTCAGGGTTTCTATTCTTGGACAAACATCATGACCAAGAAGTAA
GTTGGGGAGGAAAGGGTTTATTTGGCTTACACTTCCATAATGCTGTTCAT
CACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCT
GATGCAGAGGCCATGGAGGGATGTTTCTTACTGGCTTGCTTCCCCTGGCT
TGCTCAACCTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGT
CCCACCCACAAGGGGGCCTTTCCCCCTTGATCACTAATTGAGAAAATGCC
TTACAGTTGGATCTCATGGAGGCATTTTCTCAACTGGAAGCTCCCTTCTC
TGGGAAAACTCCCTCTGGGGCAAGTTGAACCCAAACTAACCGGGCCACTA
CCCGAAGCTTCTGGCCTTTTTTACACCCCCCTTCCTAAATTTTCCCCAAA
CCCTGGGGGGGGGGGGGGTTGTTTTTTTTAA

Query= MSMg01no371_e18.g1 MSMg01no371_e18.g1 CHROMAT_FILE:
MSMg01no371_e18.g1 PHD_FILE: MSMg01no371_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:40 2005
         (499 letters)



>mm_chr1_51031648_51032546
          Length = 899

 Score =  770 bits (398), Expect = 0.0
 Identities = 443/458 (96%), Gaps = 3/458 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattccctttcagtgaccataccccacgaaaacttatcttatacctctgccccagaatc 66
           |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 457 gaattccctttcagggaccataccccacgaaaacttatcttatccctctgccccagaatc 398

                                                                       
Query: 67  cagaaattgccaattgttcctgcactagggaaggactttgtgcccacctcctgccttcat 126
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cagaaattgccaattgttcctccactagggaaggactttgtgcccacctcctgccttcat 338

                                                                       
Query: 127 ggtacagtcctagttggtttgatattatacagggcgtgtcattgcagtcacaaccagaac 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggtacagtcctagttggtttgatattatacagggcgtgtcattgcagtcacaaccagaac 278

                                                                       
Query: 187 cactggagtttatgtgtttggcagctctgtcatgtttgacaaataatttttctgttcaca 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cactggagtttatgtgtttggcagctctgtcatgtttgacaaataatttttctgttcaca 218

                                                                       
Query: 247 tatttactacctgtcttagtcagggtttctattcttggacaaacatcatgaccaagaagt 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tatttactacctgtcttagtcagggtttctattcttggacaaacatcatgaccaagaagt 158

                                                                       
Query: 307 aagttggggaggaaagggtttatttggcttacactt-ccataatgctgttcatcaccaaa 365
           ||||||||||||||||||||||||  ||| |||||| ||| | ||||||| |||||||||
Sbjct: 157 aagttggggaggaaagggtttattcagctcacactttccacattgctgttgatcaccaaa 98

                                                                       
Query: 366 ggaagtcaggactggaactcaagcaggtcaggaagcaggagctgatgcagaggccatgga 425
           ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 97  ggatgtcaggactggaactcaaacaggtcaggaagcaggagctgatgcagaggccatgga 38

                                                 
Query: 426 gggatgtttctt-actggcttgcttcccctggcttgct 462
           |||||||| ||| |||||||||| ||||||||||||||
Sbjct: 37  gggatgtt-cttcactggcttgcctcccctggcttgct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)