ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGACACAATCAGAATCACAGGAAGGAC
AGGCTCCAGTCAGATATAGCAAGGGCAGGAGGCACTAGAGATAATCAGGT
GGTGGAGGCAAGCATAAAAACAGAAGCAACAGAAACCAAGGTTACTTGGC
ATCATCAGAACCCAATTCTCCCACCATAGCAAGTCCCAGATACACCATCA
CACCTGAAAAGCAAGATTCGGATCTAAGTTCAGTTCTCATGATGATGATA
GAGGACTTTAAGCAGGACATAAATAACTCCCTTAAAGAAACACAGGAGAA
CCCAGGTAAACAGCTAGAAGCCCTTAAAGAGGAAATACAAAAATTCCTTA
AAGAATTACAGGAAAATACAATCAAACAGGTGAAGAAAACGAACAAAGTC
ATCCAAGACCTAAAAATGGAAATAGAAACAATAAAGAAATCACAAAGGGA
GAGAACCCTGGAGTTAGAAGACCTAGGAAAGAGACCAGGAGTCATAGATG
CNAGCATCACCAACNGAATACAAGAGATAGAAGAAAGAAGCTCAGGTACA
GAAGATACCTTAAAAGCTTTGACCCCACAGGCCAAGAAAAATGCCAAAGG
AAAAAGCTCCTAACCCCCAATTCCCGGAATCCCGGGACCCTGGGGAAAAA
GAAACCTTATGGTATAACGGTTTTAAAAAAAAAAAAAAAGTCCCCACTTT
AAGGGGGCGGATATTCTCTTTCCCCAAA

CTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTTTGAAAATCAGAGTCAGATGCCAACTAAAGGTAGGCATTCAGCT
TCCTAGAAAATCTAGGACAGGGATATCATGTTGAGGATTGTTTCAGAAAG
AAGACACCCTGTTCCTTAAGAAAACATGGATGAATTGCAAGCCAGATGTA
CTTATATAGCTATTATAGACTTTCAATACATTTATTAAAAAGATGAAAAA
CAAAACAGAAGAAGGGTAAAGTGGAAGTGGAGGAAGAAGTCAATTTCCGA
AAGGGAAAGTAGGCTCTTCACTCTTTATATTACCTATTACAGTAGGGAAA
TAGCCATTCCTCCTGATTTCTTCTCTGTGAATGAATGAATCTGGAGGAGA
GTCTGAGCTCTCAAAGGGATCTGGAGGGATGATCCATGTAGGTCCAGACT
TCAGACAGACAGTTGACTGTGAAATCATTTTGGACACTTGGTTGACCAGT
TATCTCCAAGGATACAGATGTCCATAGCCACTGGAGTTCCCTTTAGTGTT
GTAACAACACGATAGGTTTCTGAAGACTTTCTTTTTGCTGTTTTACCCAC
TCCGAAGTTATCACTCAGTTAAGTAACCTGGCCACCAATCCTAAAAAAAT
TTTCTAGGCTCTTGTGCAAGACCTACATGGTGCAACTGCCCTCCTTGGTC
TCTGGTGTGAATTATGGGGCTTTTAAACATATCCTTTATCCCCTCCCCCC
TTCCTCTTTTTCGTTCTTCTTTTCTTTTAATCATATCCAN

Query= MSMg01no371_h08.g1 MSMg01no371_h08.g1 CHROMAT_FILE:
MSMg01no371_h08.g1 PHD_FILE: MSMg01no371_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:54 2005
         (466 letters)



>mm_chr1_161284509_161285374
          Length = 866

 Score =  888 bits (459), Expect = 0.0
 Identities = 462/463 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcattttgaaaatcagagtcagatgccaactaaaggtaggcattcagcttcctag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ggaattcattttgaaaatcagagtcagatgccaactaaaggtaggcattcagcttcctag 607

                                                                       
Query: 64  aaaatctaggacagggatatcatgttgaggattgtttcagaaagaagacaccctgttcct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aaaatctaggacagggatatcatgttgaggattgtttcagaaagaagacaccctgttcct 547

                                                                       
Query: 124 taagaaaacatggatgaattgcaagccagatgtacttatatagctattatagactttcaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 taagaaaacatggatgaattgcaagccagatgtacttatatagctattatagactttcaa 487

                                                                       
Query: 184 tacatttattaaaaagatgaaaaacaaaacagaagaagggtaaagtggaagtggaggaag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tacatttattaaaaagatgaaaaacaaaacagaagaagggtaaagtggaagtggaggaag 427

                                                                       
Query: 244 aagtcaatttccgaaagggaaagtaggctcttcactctttatattacctattacagtagg 303
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 426 aagtcaatttccgaaagggaaagtaggctctccactctttatattacctattacagtagg 367

                                                                       
Query: 304 gaaatagccattcctcctgatttcttctctgtgaatgaatgaatctggaggagagtctga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gaaatagccattcctcctgatttcttctctgtgaatgaatgaatctggaggagagtctga 307

                                                                       
Query: 364 gctctcaaagggatctggagggatgatccatgtaggtccagacttcagacagacagttga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gctctcaaagggatctggagggatgatccatgtaggtccagacttcagacagacagttga 247

                                                      
Query: 424 ctgtgaaatcattttggacacttggttgaccagttatctccaa 466
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctgtgaaatcattttggacacttggttgaccagttatctccaa 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)