Query= MSMg01no371_o16.b1 MSMg01no371_o16.b1 CHROMAT_FILE:
MSMg01no371_o16.b1 PHD_FILE: MSMg01no371_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:32 2005
(345 letters)
>mm_chr1_149684275_149685019
Length = 745
Score = 617 bits (319), Expect = 0.0
Identities = 337/345 (97%), Gaps = 4/345 (1%)
Strand = Plus / Minus
Query: 1 tcatttttattttttactgtttctgaaagcatcttgtatttagtacacttacctgagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcatttttattttttactgtttctgaaagcatcttgtatttagtacacttacctgagtcc 309
Query: 61 tccaggtagtccaagttgcccttgaacttgtaatcctctactcctgagtgctgaacccta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 308 tccaggtagtccaagttgcccttgaacttgcaatcctctactcctgagtgctgaacccta 249
Query: 121 aatgtgtactactacactggcataataattatctcttaattgttactctatatttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aatgtgtactactacactggcataataattatctcttaattgttactctatatttttatt 189
Query: 181 tatttaatttgtttgtttgtttgtttgtttttcaagacagggtttctctgtatagccctg 240
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tatttaa----tttgtttgtttgtttgtttttcaagacagggtttctctgtatagccctg 133
Query: 241 gctctcctgtaactcactgtgtagaccagggtggtcttgaactcagaaatccgcctgctt 300
||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gctgtcctggaactcactctgtagaccagggtggtcttgaactcagaaatccgcctgctt 73
Query: 301 ctgcctcccgagtgctgggactataggacatgtatatttaaaatt 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctgcctcccgagtgctgggactataggacatgtatatttaaaatt 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_o16.g1 MSMg01no371_o16.g1 CHROMAT_FILE:
MSMg01no371_o16.g1 PHD_FILE: MSMg01no371_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:32 2005
(477 letters)
>mm_chr1_149594008_149594885
Length = 878
Score = 876 bits (453), Expect = 0.0
Identities = 468/473 (98%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 6 gaattctatactttctcatttattcactatattgattcatttgagctgtttctttagatt 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctatactttcttatttattcactatattgattcatttgagctgtttctttagatt 265
Query: 66 ttcagaaaaaa-tgcagcatgtctgcattgtcttgtacaacttttatataaacctcacaa 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcagaaaaaaatgcagcatgtctgcattgtcttgtacaacttttatataaacctcacaa 325
Query: 125 aagaggatacaagattcaactttgtagagatctttgttatgtaataatagattacaatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aagaggatacaagattcaactttgtagagatctttgttatgtaataatagattacaatgt 385
Query: 185 taaagcagttttcattcttttcagtgctcttaaattcacattgcttgcaatgtctctttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taaagcagttttcattcttttcagtgctcttaaattcacattgcttgcaatgtctctttg 445
Query: 245 attttcagacacttagctagcagttcttagagcaatgcagcaagaaaattttagctacct 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 446 attttcagacacttagctagcagttcttagagcaatgcagcaagaaaagtttagctacct 505
Query: 305 tatcattgtgaactcacagaaattgctgtctacatttgatatatactattgaatgcataa 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catcattgtgaactcacagaaattgctgtctacatttgatatatactattgaatgcataa 565
Query: 365 gtacatagcattaggaacaatatatatgtaaatgattaaaatgttcttgattcaattaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtacatagcattaggaacaatatatatgtaaatgattaaaatgttcttgattcaattaaa 625
Query: 425 agagatgcagagttgaaaattaatataattacaaaatgatcaaaattacttaa 477
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agagattcagagttgaaaattaatataattacaaaatgatcaaaattacttaa 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
