ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAACAATCACAGAAACAACAAAAAGCCTACAAATTTATGGAAACTGAA
CAACTCTATACTCAATGGTCACTGGGTCAGAGAAGAAACAAAAGAATAAA
TTAAACATTTCCTCTAATTAATTGAAAATGAAAGTGCAACATAACCAAAT
GAGTCAAAGACACCAAATAGGAATAGATGACAGGAAATAATCAAAATTAG
GACTGAAATAAATAAGTTAGAAACAAAGAGAACTATACAAAGAATCAGTG
AAACAATATCTGGTTCTTCAGAAAAATCAACATGACAGACAAACCTTAAG
CCAAAATAACTAAAAGGCAGAGGCAGTATCCAAATTAACAAAATCAGAAA
TGAAAAGGAGACATAACAACAGACACTTGGGAAATTAAAACAAAGCAACC
CCCTCAAAACATTAGATTTTACTTTAAAAGCCTGTACTCTATAAACTTGG
AAAAACTAAATAAAATGAATGATTTTCTAGACAGATACCACTTACCAAAG
TTAAATAATAACCAGGTAATAGTATTTAAATAATCCTATAACCTCTATGT
AAATGGAAGAAGTCATTAAAAATCTTCCAACCAAAATAGGACTATGACCA
GATGGTTTTAGCTCAGAATTTAACCAGGCTCTTTAAACAGGTAATACCAG
AAACTATTCCACAAAATAGAAACAGAAGGAATG

GCTAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTAAATAAAAGACATAAGAATACTTTAAA
CCCTGCTTCAAACAGACATGTTAAACAATCATGAACACTATTTTTGTTTT
GTTTTGTTCTGTTTTACAATGCTTAGAAAATAAAGGAATGTATATGTTGT
AGTTCTTATTGTGGTTGTCTAATTAAGACAGCCCAGTATCAACTAAAATA
AATGAATAAATAAAAGAGCTGTAACACTAATATCCTCAGAGAATCTCCCA
AACATGCATAACTCAGTCATTTTCATTGACTGGCTAGTGAACAACACACA
AAAAAGGAGAATATCTGAGTCTTGCTCTCTTCCAGAGGCACATAGCCCAA
GGAAGAAATACAGACTGACTGGGGTAGAAGTATTAAATATCCACACATGG
CCTTACAACTGCTCAGTGCTGACAATATTTTTTAAATTATTTTAAAAACT
AACACAATGTTTCTTTGTTCACTGAATGATTAGTATATATATCCCCTTTA
TTCCTTTTCTATAGATTTTAGTATCTTCTTTCTTATCTATTTTATTCTCC
TAATAACAAACTTCTATCTATATATCTAACTAACTATCATTTTATTTTGA
TTCCCACAAAGTTTCTCTTGCCTTTCTTGAAGGCTCTGCTTCCTCTGGGC
CTATCTCCAGAGAAAAAAGCCCCAGGT

Query= MSMg01no372_a13.g1 MSMg01no372_a13.g1 CHROMAT_FILE:
MSMg01no372_a13.g1 PHD_FILE: MSMg01no372_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:42 2005
         (489 letters)



>mm_chr1_3670220_3671108
          Length = 889

 Score =  855 bits (442), Expect = 0.0
 Identities = 478/490 (97%), Gaps = 1/490 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaaataaaagacataagaatactttaaaccctgcttcaaacagacatgttaaacaatca 60
           |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||
Sbjct: 201 ttaaataaaagacataagaatactttaaaccctgctccaaacagacacgttaagcaatca 260

                                                                       
Query: 61  tgaacactatttttgttttgttttgttctgttttacaatgcttagaaaataaaggaatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacactatttttgttttgttttgttctgttttacaatgcttagaaaataaaggaatgt 320

                                                                       
Query: 121 atatgttgtagttcttattgtggttgtctaattaagacagcccagtatcaactaaaataa 180
           ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 321 atatgttgtagttcttattgtggttgtctaattaagacaacccaatatcaactaaaataa 380

                                                                       
Query: 181 atgaataaataaaagagctgtaacactaatatcctcagagaatctcccaaacatgcataa 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaataaataaaagagccgtaacactaatatcctcagagaatctcccaaacatgcataa 440

                                                                       
Query: 241 ctcagtcattttcattgactggctagtgaacaacacacaaaaaaggagaatatctgagtc 300
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 441 ctcagtcattttcattgactggctggtgaacaacacacaaaaaaggagaatatctgagcc 500

                                                                       
Query: 301 ttgctctcttccagaggcacatagcccaaggaagaaatacagactgactggggtagaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgctctcttccagaggcacatagcccaaggaagaaatacagactgactggggtagaagt 560

                                                                       
Query: 361 attaaatatccacacatggccttacaactgctcagtgctgacaatatttttta-aattat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 561 attaaatatccacacatggccttacaactgctcagtgctgacaatattttttttaattat 620

                                                                       
Query: 420 tttaaaaactaacacaatgtttctttgttcactgaatgattagtatatatatccccttta 479
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 tttaaaaactaacacaatgtttctttgttcactgaatgatttgtatatatatccccttta 680

                     
Query: 480 ttccttttct 489
           ||||| ||||
Sbjct: 681 ttcctcttct 690


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)