TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CATTGTTTTTAATAACTGAGTAATACTCCATTGCGTAATGTACCACATTT
TCTGTATGCTTTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTG
GCTATTATAAATAAGGCTGCGATGAACATAGTGGAACATGTGTCCTTATT
ACAAGTTTGAGCATCTTCTGGGTATATGTGCAGGAGTGGTATTGCTGGAT
CTTCCAGTAGAACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTC
CAGAGTGGTTGTACTAAATTGCAGCCCCACGAGCAATGGAGGAGTGTTCC
TCTTTCTCCACATCCTCACCAGCATCTGGCTCAGTGGTGAAGAGCAATGC
CTACTTTTCCAGAGGTCCTGAGTTCAATTCCCAACGACCACATGGTGGCT
CACAACCATCTCTAATGAGGTCTTGTGACCTCTTCTGGCCTACAGGCATA
CATGCAGGCAGAAACCTGTATACATAATAAATAAATTTAANAAAAAGATC
ATCTTCTAAAGTTGTCAAAGGTGGATTGGTTGGTGTGATAACAGCTTTGG
TGATTTTGGGCTGTGGTCCCATAAACTTGTCAAACCCAAAGAAGGAATCT
CTGACCCCATAAAAAAACGGTGACTAAGGGTAAAAAGGGGTCCAATCCGG
CCGAAAGAAATTTTCCTTGGGAAAGGACAACTTTGGAATGTCCAGAAATG
G

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTAGGAATGTGCTCATATCCTTACTGTCTAT
ATTCTTGATTAGCCACACATCCAAGGTTATAATACTTGAAGCAGAGTGTG
CACGGTGAAAACTGCTTATGGGCTAATGAGGTGGTGTAGCACAGCATTTA
TGACCAAGTTTGATAGTGTGATCCCCAGAGACCTCATGGAAGAAGCATAT
TTACTCTTAGAAGTCAATACTGAGCCCCACACACATGCTGTGGCATGCAC
CATGCAACACACACATAGATACACAATAAATAAATGTAATAAAGATGTAA
GTGCTAAAATATTCTACTTCAGCCAGTCCTTCTTCTGCCTGGAAATGATC
TTCATGACAAGAACTCAATGATATGAAACAAAGTCTGATAAACAATGAAG
CTACTCCACTCTCCTGTTAAGTAAATGATTGCCATGGGGACAGTAAAGTC
CCAATTAGTTGCATTGGCATTAGTCAACAATGACAATGAATGAATATGTT
CAGAGCTATGATTTGTGGAAATGAACTTCGCAATTCCTTTTCCGAAGNAC
ATAGGCAAATCCTACCTCTCCTGTTATGTAGGACACCATGACAAAGATTG
TCCCCCTTCCGAATTATAAGAAAACACCTGGCTCTTTGGATGGGAATCCC
GAAAACAAAAAACCACCTTCCTAACAAAAACAAAGAAAAACCTGGGAGGA

Query= MSMg01no372_f06.g1 MSMg01no372_f06.g1 CHROMAT_FILE:
MSMg01no372_f06.g1 PHD_FILE: MSMg01no372_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:03 2005
         (432 letters)



>mm_chr1_125421758_125422589
          Length = 832

 Score =  774 bits (400), Expect = 0.0
 Identities = 424/432 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaggaatgtgctcatatccttactgtctatattcttgattagccacacatccaaggtta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggaatgtgctcatatccttactgtctatattcttgattagccacacatccaaggtta 260

                                                                       
Query: 61  taatacttgaagcagagtgtgcacggtgaaaactgcttatgggctaatgaggtggtgtag 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatacttgaatcagagtgtgcacggtgaaaactgcttatgggctaatgaggtggtgtag 320

                                                                       
Query: 121 cacagcatttatgaccaagtttgatagtgtgatccccagagacctcatggaagaagcata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagcatttatgaccaagtttgatagtgtgatccccagagacctcatggaagaagcata 380

                                                                       
Query: 181 tttactcttagaagtcaatactgagccccacacacatgctgtggcatgcaccatgcaaca 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 381 tttactcttagaagtcaatactgagccccacacacatgctgtggtatgcaccacgcaaca 440

                                                                       
Query: 241 cacacatagatacacaataaataaatgtaataaagatgtaagtgctaaaatattctactt 300
           |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 441 cacacatagatacacaataaataaatgtaataaaaatgtaagtgctgaaatattatactt 500

                                                                       
Query: 301 cagccagtccttcttctgcctggaaatgatcttcatgacaagaactcaatgatatgaaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccagtccttcttctgcctggaaatgatcttcatgacaagaactcaatgatatgaaac 560

                                                                       
Query: 361 aaagtctgataaacaatgaagctactccactctcctgttaagtaaatgattgccatgggg 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 561 aaagtctgataaacaatgaagctactccactctcctgttaagtaaatgattgccctgagg 620

                       
Query: 421 acagtaaagtcc 432
           ||||||||||||
Sbjct: 621 acagtaaagtcc 632


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space:   348129
Effective search space used:   348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)