CCTATTTCGAGAGGATCCGCGGAATTCAAGGCCCATACCTAAACATGATA
AAAGCAATCTACAGCAAATCAGTAGCCAACATCAAAGTAAATGGAGAGAA
GCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTT
CACCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGA
CAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGTCAAAAT
ATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATT
CCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGA
TATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAA
ACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAA
ATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTG
TATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAG
AAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATTGTAA
AAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCATTCCCCATC
AAAATTCCAACTCAATTCTTCAATGAATTAAAAGGAGCAATTTGCCAATT
TCATCTCGGAATAACAAAAAACCTA

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAATAGCAGAGGCTATAATTCTGTACA
TTCAAATAATTGCAATGCCAATTTATAATATAAAATGTCATATCAATCAT
AAACAAGAACATGGATGGTGAATTTGGATGTATTGTTGCAACAAGAAACC
CATTGATTAACTGTTTCAAACTTAAGAATGCATTAAACTAGTCAATAATG
CCAAGAAAAGATCATAGATTCTCTCTGCTTGACAATAAATATTTTCAAAA
AATAGTTATAATATAAAAACAATATTTATAATTTGGAGAAGCTAGTGCAA
AGATTCAGAGGAATTGCTGGTTGATATACTTAGCCAGAAAAATTAGATTT
TTAAGAACAGAAAAGATCTTTGAACTATAGTTTAGAGGGGTTTCTGACTC
TCACAGGTTGCCTGTGGCCCAGGGTTGCCATCCAGACAACCTAATGCACT
TCTCTGAAAGATGAGGAATGCTGGACTCACCAAAATTAGATGACTTCAGC
TCTTATTTCAGGGTGAATAAACGTTTAGGAAGTTATATACAAAGTTCTGA
GAACTGGAAAACCTACTTAGAGAACTAGAGTCTGAAATTGCCGATGAAGG
CCGTCCGTGAATCAAAAGAAACTGTCTTTCTGAACCAAATCTGGGGTTCT
GTAAATTACATGGATAAAACACTGTCTGGTTTAATATCCTTTTTA

Query= MSMg01no373_d04.g1 MSMg01no373_d04.g1 CHROMAT_FILE:
MSMg01no373_d04.g1 PHD_FILE: MSMg01no373_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:07 2005
         (503 letters)



>mm_chr1_178354382_178355284
          Length = 903

 Score =  940 bits (486), Expect = 0.0
 Identities = 500/506 (98%), Gaps = 3/506 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatagcagaggctataattctgtacattcaaataattgcaatgccaatttataatataa 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 198 caatagcagaggctataattctgtacattcaaacaattgcaatgccaatttataatataa 257

                                                                       
Query: 61  aatgtcatatcaatcataaacaagaacatggatggtgaatttggatgtattgttgcaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aatgtcatatcaatcataaacaagaacatggatggtgaatttggatgtattgttgcaaca 317

                                                                       
Query: 121 agaaacccattgattaactgtttcaaacttaagaatgcattaaactagtcaataatgcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agaaacccattgattaactgtttcaaacttaagaatgcattaaactagtcaataatgcca 377

                                                                       
Query: 181 agaa---aagatcatagattctctctgcttgacaataaatattttcaaaaaatagttata 237
           ||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaaaagaagatcatagattctccctgcttgacaataaatattttcaaaaaatagttata 437

                                                                       
Query: 238 atataaaaacaatatttataatttggagaagctagtgcaaagattcagaggaattgctgg 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atataaaaacaatatttataatttggagaagctagtgcaaagattcagaggaattgctgg 497

                                                                       
Query: 298 ttgatatacttagccagaaaaattagatttttaagaacagaaaagatctttgaactatag 357
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttgatataattagccagaaaaattagatttttaagaacagaaaagatctttgaactatag 557

                                                                       
Query: 358 tttagaggggtttctgactctcacaggttgcctgtggcccagggttgccatccagacaac 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttagaggggtttctgactctcacaggttgcctgtggcccagggttgccatccagacaac 617

                                                                       
Query: 418 ctaatgcacttctctgaaagatgaggaatgctggactcaccaaaattagatgacttcagc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctaatgcacttctctgaaagatgaggaatgctggactcaccaaaattagatgacttcagc 677

                                     
Query: 478 tcttatttcagggtgaataaacgttt 503
           ||||||||||||||||||||||||||
Sbjct: 678 tcttatttcagggtgaataaacgttt 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)