NCTCCTATATCGAGAGGATCCGCGGAATTCTTTGTTTAGCTCTGAGCCCC
ATTTTTAATGGGGTTATTTAATTTTCTGGAGTCCACCTTCTTGAGCTCTT
TATATATATTGGATATTAGTCCCCTATCTGATTTAGAATTGGTAAAGATC
ATTTCCCAATTTGTTGGTGGCCTTTTTGTCTTATTAACAGTGTCTTTTGC
CTTACAGACAAAGCTTTCTTCTTATAGAGTTGAGTTTAATTCATTTAGCA
ATAAAAGAGTAGAAACTTTTTCTTTCTCTATGCAATAAAATTAGAGGTCA
TTTTTCATCCAGAATGAGTGAGTTCTTTCTGCACTCAAGCTTGGTCTTTT
GCTCTATATACATTTGTAAGTATGGATGCGTGTATGTAAATATATAATTT
TGAGATAAGTATATAGCTTGACACAACTTGTTTTAATGGACATGTATGAA
TGTGTATGCATGAATTTTTATATGAATTTATGTGAGTTTATTCATATTTG
CTTGTGTGAACAGTTTTTCTCCTGTGAGTATAACCTTTATTTTTTCTTGG
TTCAATAGAAGTTTGTTTCTCCAAATGGACCCCAAGCCTGACAAGATAGA
CACATCTGGACAAGAAAGAATGCCGCTTTTTTTCTCCCAAGAACTCCCAA
AGGCGGGCCACACCCTTTTCAAAGGGGCCTATTTTTACAAAGGTACATGG
TTTTTATTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTTTGTTGATGAACAGCAATGTGGAAGTTTAAAGTGAAAAAA
TCCTTTCCTTTACAACTTGCTTTTTGGTCATGGTGTTCATCGCAGCAACA
GAAACCCTAAGATACTGAATATGAATGGATTACTTGCTGCAATCTCAGAA
CAAATCCTTTTAGTTATTGTTTTATTTTTTGCACTTTTATTAGATATTTT
CTTAATTTCTATTTAACAAATCCTTAAAGAATGAAAAAATTACCCTTTAA
AGATGATTTAAGAAAATAGTTTCATGAGTGCAAGTATTCTTAGTGAAGAA
TTTATGAATTTGTTGAAATAACAATAGTGGATTTAGAATACTACATTAAT
ATATTTGATATGATGTACAACATCATGTTTTGAGATAACTGACTATTTTT
GAAAGGCAGTCTAGTGTGGGGAAATTCTGTCAGATGGTATTGTGTGCTGC
AGTCTTCATCAGAAGAAGAATCATTCTGTGTGATAAAACTTTCACTGTCA
CCTTATTTTAAGAAGTTGTCACAGCTGCTCTGCCATGACCAGATGGTCAC
CATTAACATGAAACAAGTCTGCACTTGCAAAGGATAAAATAATTTTGATA
TGATCCCGAAGATTTTAACCTTTTTATTTTTCCCAATAATGTATTTTTGG
AAATAGATAT

Query= MSMg01no373_j17.g1 MSMg01no373_j17.g1 CHROMAT_FILE:
MSMg01no373_j17.g1 PHD_FILE: MSMg01no373_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:36 2005
         (529 letters)



>mm_chr1_4263037_4263961
          Length = 925

 Score =  961 bits (497), Expect = 0.0
 Identities = 518/527 (98%), Gaps = 4/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   ttgttgatgaacagcaatgtggaagtttaaagtgaaaaaatcctttcctttacaacttgc 62
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 825 ttgttgatgaacagcaatgtggaagtttaaagtgaacaaatcctttcctttacaacttgc 766

                                                                       
Query: 63  tttttggtcatggtgttcatcgcagcaacagaaaccctaagatactgaatatgaatggat 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tttttggtcatggtgttcatcgcagcaacagaaaccctaagatactgaatatgaatggat 706

                                                                       
Query: 123 tacttgctgcaatctcagaacaaatccttttagttattgttttattttttgcacttttat 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tacttgctgcaatctcagaacaaatccttttagttattgttttattttttgcacttttat 646

                                                                       
Query: 183 tagatattttcttaatttctatttaacaaatccttaaagaatgaaaaaattaccctttaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 645 tagatattttcttaatttctatttaacaaatccttaaagaatgaaaaaaataccctttaa 586

                                                                       
Query: 243 agatgatttaagaaaatagtttcatgagtgcaagtattcttagtgaagaatttatgaatt 302
           ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agatgaacaaagaaaatagtttcatgagtgcaagtattcttagtgaagaatttatgaatt 526

                                                                       
Query: 303 tgttgaaataacaatagtggatttagaatactacattaatatatttgatatgatgtacaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgttgaaataacaatagtggatttagaatactacattaatatatttgatatgatgtacaa 466

                                                                       
Query: 363 catcatgttttgagataactgactatttttgaaaggcagtctagtgtggggaaattctgt 422
           ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catcatgttttgagat----gactatttttgaaaggcagtctagtgtggggaaattctgt 410

                                                                       
Query: 423 cagatggtattgtgtgctgcagtcttcatcagaagaagaatcattctgtgtgataaaact 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagatggtattgtgtgctgcagtcttcatcagaagaagaatcattctgtgtgataaaact 350

                                                          
Query: 483 ttcactgtcaccttattttaagaagttgtcacagctgctctgccatg 529
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttcactgtcaccttattttaagaagttgtcacagctgctctgccatg 303


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 925
Length adjustment: 10
Effective length of query: 519
Effective length of database: 915
Effective search space:   474885
Effective search space used:   474885
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)