Query= MSMg01no374_l19.b1 MSMg01no374_l19.b1 CHROMAT_FILE:
MSMg01no374_l19.b1 PHD_FILE: MSMg01no374_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:04 2005
(503 letters)
>mm_chr1_9495968_9496870
Length = 903
Score = 920 bits (476), Expect = 0.0
Identities = 494/500 (98%)
Strand = Plus / Plus
Query: 4 ggaattctccttaatattcagattttgtcttctcgttgtataccaaagtttatcgataat 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 ggaattctccttaatattcagattttgtcttctcattgtataccaaagtttatcgataat 263
Query: 64 ctaattattttctttagggtatcattaaccttgactgaactaattcctttaccttgtctt 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctatttattttctttagggtatcattaaccttgactgaactaattcctttaccttgtctt 323
Query: 124 ccatccctgatattctgttttccatatgactcattgccttggtaactctttcctttgagt 183
|||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 324 ccatccctgatattctgttttccatatgactcattgccgtggtgactctttccattgagt 383
Query: 184 tccttattttactgtttttcatttacaatatcatcttagttttgacttatattctttatt 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccttatttgactgtttttcatttacaatatcatcttagttttgacttatattctttatt 443
Query: 244 ttaatatcactaatgatttctattgaataataactgactgttcatagaaacttggcttgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaatatcactaatgatttctattgaataataactgactgttcatagaaacttggcttgg 503
Query: 304 gatgatatattccaaaagctaaaagaaaataactatcaacccattttttaaggtaactag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatgatatattccaaaagctaaaagaaaataactatcaacccattttttaaggtaactag 563
Query: 364 aacaactggcctgacacttatcccgagcttttgtccccaccggcaagaacacactcagga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aacaactggcctgacacttatcccgagcttttgtccccaccggcaagaacacactcagga 623
Query: 424 caaccggaatggcaaagcttttattgcttacttatcaggagggaagaccccaaaccggga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaccggaatggcaaagcttttattgcttacttatcaggagggaagaccccaaaccggga 683
Query: 484 aaatggtgctgcttatatag 503
||||||||||||||||||||
Sbjct: 684 aaatggtgctgcttatatag 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_l19.g1 MSMg01no374_l19.g1 CHROMAT_FILE:
MSMg01no374_l19.g1 PHD_FILE: MSMg01no374_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:04 2005
(452 letters)
>mm_chr1_9680119_9680970
Length = 852
Score = 851 bits (440), Expect = 0.0
Identities = 449/452 (99%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggctggcctcgaactcagaaattctcctgcctctgcctcccaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 actctgtagaccaggctggcctcgaactcagaaattctcctgcctctgcctcccaagtgc 696
Query: 61 taggattaaaggcatgcgccaccacgcccggcccccagttcattttttaaagtgtcaatt 120
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 695 taggattaaaggcatgcgccactacgcctggcccccagttcattttttaaagtgtcaatt 636
Query: 121 tttaatctacttaattgaagtataatgtatatcttctatgaaagtgtttcatgttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttaatctacttaattgaagtataatgtatatcttctatgaaagtgtttcatgttttatt 576
Query: 181 ggtaatttgaaaggtataatttataaatatactttcactaccacatagagactagtgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggtaatttgaaaggtataatttataaatatactttcactaccacatagagactagtgatg 516
Query: 241 cctttaagatgcttgtactaatttgagctgctatgcttaaaatcttatatctgcttcata 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cctttaagatgcttgtactaaattgagctgctatgcttaaaatcttatatctgcttcata 456
Query: 301 tagtttaatcctgtcatttatttctcaattctggattaattttttatggactatgtcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tagtttaatcctgtcatttatttctcaattctggattaattttttatggactatgtcttg 396
Query: 361 ctgcttgctgtattataaggatagtatagaggtacatgtcttaatttcaaatatgttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctgcttgctgtattataaggatagtatagaggtacatgtcttaatttcaaatatgttgtt 336
Query: 421 tttaatttgtagcctaaacctatgattaattg 452
||||||||||||||||||||||||||||||||
Sbjct: 335 tttaatttgtagcctaaacctatgattaattg 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
