MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-374O13
Chromosome	1 (Build37)
Map Location	139,779,172 - 139,779,683
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Nr5a2, Rnu7-ps3, LOC100042567
Downstream gene	LOC100043143, Ptprc, LOC100042596, Atp6v1g3, LOC100042600, Nek7, LOC545363, LOC667745, Lhx9, 2310009B15Rik, 1700019P21Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Nr5a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26424 MGI:1346834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnu7-ps3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19869 MGI:105101
definition	note : U7 small nuclear RNA, pseudogene 3 pseudo : _no_value

name	LOC100042567 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042567
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100043143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Ptprc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19264 MGI:97810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Atp6v1g3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338375 MGI:2450548
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042600 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Nek7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59125 MGI:1890645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545363 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545363
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC667745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Lhx9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16876 MGI:1316721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	2310009B15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69549 MGI:1916799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019P21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75546 MGI:1922796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Nr5a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14010846 GeneID:26424 MGI:1346834
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 5, group A, member 2 transcript_id : NM_030676.1

name	LOC100043143 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234320 GeneID:100043143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043143 transcript_id : XM_001480013.1

name	Ptprc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326511 GeneID:19264 MGI:97810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, C transcript_id : NM_011210.2

name	Atp6v1g3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130425 GeneID:338375 MGI:2450548
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit G3 transcript_id : NM_177397.3

name	LOC100042600 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234281 GeneID:100042600
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042600 transcript_id : XM_001478479.1

name	Nek7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130435 GeneID:59125 MGI:1890645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 7 transcript_id : NM_021605.3

name	LOC545363 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234322 GeneID:545363
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC545363 transcript_id : XM_001480040.1

name	Lhx9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110611157 GeneID:16876 MGI:1316721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 9 transcript_id : NM_010714.3

name	Lhx9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131184 GeneID:16876 MGI:1316721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 9 transcript_id : NM_001025565.2

name	Lhx9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110611158 GeneID:16876 MGI:1316721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 9 transcript_id : NM_001042577.1

name	2310009B15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487010 GeneID:69549 MGI:1916799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310009B15 gene transcript_id : NM_001081226.1

name	1700019P21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234283 GeneID:75546 MGI:1922796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 1700019P21 gene transcript_id : XM_001478510.1

name	Nr5a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14010847 CCDS:CCDS15328.1 GeneID:26424 MGI:1346834
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence IMP]; GO:0042632 - cholesterol homeostasis [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : fetoprotein transcription factor product : nuclear receptor subfamily 5, group A, member 2 protein_id : NP_109601.1

name	LOC100043143 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234321 GeneID:100043143
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480063.1

name	Ptprc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326512 CCDS:CCDS15330.1 GeneID:19264 MGI:97810
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0005925 - focal adhesion [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0019901 - protein kinase binding [Evidence ISS] [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005001 - transmembrane receptor protein tyrosine phosphatase activity [Evidence ISS] GO_process : GO:0030183 - B cell differentiation [Evidence IMP]; GO:0042100 - B cell proliferation [Evidence IMP]; GO:0050853 - B cell receptor signaling pathway [Evidence IMP]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0051607 - defense response to virus [Evidence IMP]; GO:0001960 - negative regulation of cytokine and chemokine mediated signaling pathway [Evidence IDA]; GO:0006469 - negative regulation of protein kinase activity [Evidence IDA] [Evidence ISS]; GO:0001915 - negative regulation of T cell mediated cytotoxicity [Evidence IMP]; GO:0050857 - positive regulation of antigen receptor-mediated signaling pathway [Evidence IMP]; GO:0045860 - positive regulation of protein kinase activity [Evidence ISS]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] [Evidence IDA]; GO:0051726 - regulation of cell cycle [Evidence IDA]; GO:0051209 - release of sequestered calcium ion into cytosol [Evidence IDA]; GO:0030217 - T cell differentiation [Evidence IMP]; GO:0042098 - T cell proliferation [Evidence IMP]; GO:0050852 - T cell receptor signaling pathway [Evidence ISS] codon_start : 1 note : lymphocyte common antigen product : protein tyrosine phosphatase, receptor type, C protein_id : NP_035340.2

name	Atp6v1g3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893577 CCDS:CCDS15331.1 GeneID:338375 MGI:2450548
definition	GO_component : GO:0016020 - membrane [Evidence IC] GO_function : GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism [Evidence IDA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015991 - ATP hydrolysis coupled proton transport [Evidence IC] codon_start : 1 product : ATPase, H+ transporting, V1 subunit G, isoform 3 protein_id : NP_796371.1

name	LOC100042600 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234282 GeneID:100042600
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478529.1

name	Nek7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11037792 CCDS:CCDS15332.1 GeneID:59125 MGI:1890645
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : NIMA-related expressed kinase 7 product : NIMA (never in mitosis gene a)-related expressed kinase 7 protein_id : NP_067618.1

name	LOC545363 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234323 GeneID:545363
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480090.1

name	Lhx9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754542 CCDS:CCDS15333.1 GeneID:16876 MGI:1316721
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : LIM homeobox protein 9 isoform b protein_id : NP_034844.1

name	Lhx9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909340 CCDS:CCDS15334.1 GeneID:16876 MGI:1316721
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : LIM homeobox protein 9 isoform a protein_id : NP_001020736.1

name	Lhx9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110611159 GeneID:16876 MGI:1316721
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : LIM homeobox protein 9 isoform c protein_id : NP_001036042.1

name	2310009B15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487011 GeneID:69549 MGI:1916799
definition	codon_start : 1 product : hypothetical protein LOC69549 protein_id : NP_001074695.1

name	1700019P21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234284 GeneID:75546 MGI:1922796
definition	codon_start : 1 product : hypothetical protein LOC75546 protein_id : XP_001478560.1

name	LOC100042567 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042567
definition	number : 4 pseudo : _no_value

name	LOC100042567 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042567
definition	number : 3 pseudo : _no_value

name	LOC100042567 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042567
definition	number : 2 pseudo : _no_value

name	LOC100042567 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042567
definition	number : 1 pseudo : _no_value

name	LOC100042596 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042596
definition	number : 1 pseudo : _no_value

name	LOC100042596 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042596
definition	number : 2 pseudo : _no_value

name	LOC667745 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667745
definition	number : 2 pseudo : _no_value

name	LOC667745 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667745
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:167297
definition	standard_name : D1Ertd811e

name	(CDS detail)
type	STS
link
xref	UniSTS:210273
definition	standard_name : RH136280

name	(CDS detail)
type	STS
link
xref	UniSTS:271761
definition	standard_name : PMC193920P1

name	(CDS detail)
type	STS
link
xref	UniSTS:161171
definition	standard_name : RH124349

name	(CDS detail)
type	STS
link
xref	UniSTS:128904
definition	standard_name : D1Mit537

name	(CDS detail)
type	STS
link
xref	UniSTS:207223
definition	standard_name : BB210524

name	(CDS detail)
type	STS
link
xref	UniSTS:207221
definition	standard_name : BB209933

name	(CDS detail)
type	STS
link
xref	UniSTS:142251
definition	standard_name : D1Mit514

name	(CDS detail)
type	STS
link
xref	UniSTS:114168
definition	standard_name : AU026553

name	(CDS detail)
type	STS
link
xref	UniSTS:210366
definition	standard_name : RH136376

name	(CDS detail)
type	STS
link
xref	UniSTS:234228
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:145335
definition	standard_name : AU048885

name	(CDS detail)
type	STS
link
xref	UniSTS:185454
definition	standard_name : BB104635

name	(CDS detail)
type	misc_feature
link
xref
definition	note : proximal sequence element

name	(CDS detail)
type	misc_signal
link
xref
definition	note : 3' signal

clone name	MSMg01-451H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233O03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-517F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-374O13.T7 (MSMg01no374_o13.b1)	MSMg01-374O13.TJ (MSMg01no374_o13.g1)
ACC	AG480590	AG480591
length	1,399	736
length of high quality (start - end)	---	515 (58 - 572)
definition	CHROMAT_FILE: MSMg01no374_o13.b1 PHD_FILE: MSMg01no374_o13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:14:18 2005	CHROMAT_FILE: MSMg01no374_o13.g1 PHD_FILE: MSMg01no374_o13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:14:18 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GGCCCCACTTCTNCCTGTCCGGCTCGCTGGAGTCATGAGAATAGTGCGCG GCGTGCGTTCTCCTTGCGTTATCGGAGCGTGGCTCACGCCGCGTGCCGCA CATCTCTTCTTCCCTCTCCTCCTCCGTAACATGCGCGCCCGCTTGCTCAC TACGCCTCTNTATGCGTCCGCTCGCGGCTGCCGGTGCGCTCGCGGCGTCT CGACATTAGCTAGTTGCAATTAACTTGCCTGTAACGTTTTTACTCTCTGT CTCTAATCGCTACCATTGTCCCCCATCTACCAGCTTATGACTCGCCTGTC GCGTTATATCCTCTCTCCATTATCTACTCCTTTCACCTATGGCTATTCCT CCTTCATCCATGTTTACTCGCGCGTCTCTCATCGCTCTTTGCGCTGCCCC GCTCGTCTCCCGCGCCTCATCTCGGCTCTGCCTCCTCCGCCAACTGCTTC ACCGCACTCTGCGCTATCGCAGCACATCTACTCTATCCCAATCATTCCGT ACTCCTGTACTACTCATTATCATATACCTCTTACTATCTACTGGCCGTAC TGCGCTCACTATCCTCTTGCATGTATTCGTCGCCTTGTTCCCCGCGTGGT GTGCTGCAGTGTCGTAAGATTGTGATTACCCGGCGCGCCAGCGCGGGGCT GCATCGAGAGCGATGCCCGGTGTTGAATAGCACGCCATTAATGTCCGATT ACCCCACTATTACAGCAACGGAACCGACTATCACTCGGGACACTCTCTAC CGATTCGTCTTATTGCACTCTTATCCTCGCTCTGTCGCATCTCCTATGCT ACGTCTCTACGCGTTGATCTGCGTGCGGTGTACACCGTCCGTGACTCTAG GCGGGGTATTCGACCTATAGTGTGTCAGCTTGCTGCCGTTACCTCGTGCC TGTAGCTGAGCCGACGATCATTTACTGCCGCGTCTGCGGCGGCCGTGAAT ATACCAGAGTCTTCTCGCGTCATACATCGTACCCATGCGTGGTTGTATAT CGCATAGCCTATTGCTGACACGCAAGTGACGCATCCTTCTGATCTCATCG CCTTTGCCACCAGTCGACATCGCTATCCATGATATACGAGACGACCCTAT GTCACCTCTCGTCGATACTGATCTTACTACACACTCAACACACTGCCTGT GCCATCCGCGCCATCCTTTCTGTCCCAGTCGTGTGTGCGCACCCATCATC GCCTCCTACATCTACTGTTTCACTTCCATCTCTCATACCTTACACACCTG TTTCTTCTCTCTTACTATCGTGTATATGTTACTCCTATCCTCCGCTCCTG TTGGTGTGCTGTCGTACGTGCTGACGTGGTACCGATGTTCCTGCGCGTTG GCGTGACCCGCTGACGCTGTGCTCATCGCCTCCCCTGCTATATCTCAGN	GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXAACATCATGATTGAGAATTTTTAGAAAAGATGGGAAGCGATGA AGAATTACACAGAGCAGAAAGTATAACCTAGGGTGGTGCACAGGCTTGTC CGCTGGTCCTGGGGTCAGAGCATCCCTTCCACCTCACAAGAGCACAGTTC CAATACAGAAGCAGGTAAGAATGGGGAGCTAGTGGCATACATCATGGACC AAGTCACTGGTTAGGAAGAATACATTTTGTAGCTGTTTAGAATATTCCAT TTTTTCTGATAGTTCTGGTTAGGTGTAAAAGTTACGATCACTCAGTCAGC TGGTGTTAAAGAGCAAATTAGATGCTACGATTTACAGTTTAACAAAACAA AGTCAATGTCTGCCATCCCATAAAACTTCCTGCATTAAGAAAGATAACTT TCAAAGTCATGCCAGTTTATCTTCATAAGTCACATCCTTGGACTGGAGAG ATGGCTCAAGGATGAAGATAACTGGCTGCTCTGTCACAGCACTTGGATTC AATTCCCAGCATCCACGTTGTGGGACACAACTATCTGTAACTCCAGTTCT GGGGGATTTAACGCACCTTTCTGGGCTCAGTGGGAACTACACATGTGTGA TGGGTAAAAATACTTGCAGATGATACCTCCCTGAGCCTATAAAATTTTAA TAAAAACCTACTCTCTCTAACCATATTTTACCCAAA
quality values	Open. Hide. 7 7 7 15 21 8 8 8 8 8 8 3 0 3 11 8 8 8 8 8 8 8 8 8 8 8 6 6 10 8 6 6 8 8 10 8 8 8 8 6 6 6 7 8 10 12 12 12 12 15 10 9 9 10 8 6 6 8 10 8 8 10 6 6 6 6 8 8 10 10 8 8 10 13 9 8 6 6 6 6 6 6 6 8 8 8 8 8 8 11 11 6 6 6 6 8 8 8 8 8 8 8 8 10 8 10 10 10 8 8 6 6 10 10 9 9 9 8 8 6 7 10 12 10 8 6 6 8 8 9 10 9 8 7 8 8 7 8 8 8 8 8 8 8 8 9 10 8 8 8 8 8 8 8 9 8 6 6 3 0 3 10 10 10 8 6 6 6 6 8 8 6 6 6 6 8 8 8 6 7 7 9 7 10 10 8 10 10 8 8 6 6 6 6 8 8 8 8 8 8 8 6 6 6 6 7 8 8 8 8 8 8 8 8 8 9 8 8 6 6 10 6 8 9 9 8 6 6 6 7 8 8 8 6 7 8 8 8 8 8 8 8 8 8 13 11 11 11 12 8 8 8 8 6 6 8 8 10 9 8 8 6 6 7 6 9 9 22 15 15 12 10 10 10 11 10 8 8 8 8 8 8 10 10 10 8 8 8 8 11 15 8 6 6 6 6 6 6 6 8 8 8 10 11 8 8 8 8 8 8 8 8 8 8 11 9 9 8 10 8 8 8 8 8 6 6 6 7 7 9 16 8 10 8 8 6 8 6 7 8 8 13 12 8 6 6 8 8 11 8 8 8 8 10 8 10 10 10 8 8 8 10 8 6 6 6 8 10 10 10 8 10 10 10 10 10 8 8 6 6 6 6 8 8 8 8 8 8 8 7 8 7 7 8 6 6 10 8 8 6 6 7 10 8 9 11 13 12 8 8 8 8 6 6 6 6 8 8 6 8 6 6 6 6 8 8 8 8 6 7 12 10 10 13 8 8 8 8 13 8 7 6 6 6 8 8 8 8 8 8 6 6 7 7 10 10 8 10 10 8 12 11 10 10 10 13 13 11 9 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 9 10 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 13 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 6 6 6 8 10 10 10 10 9 13 11 10 11 8 9 9 8 6 6 6 8 8 10 10 12 15 8 8 6 6 8 8 10 10 10 10 10 9 8 8 8 8 8 8 10 10 10 8 8 9 9 9 10 10 12 10 10 11 11 9 6 6 6 6 8 8 11 19 12 8 8 6 6 8 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 10 8 10 10 10 10 10 10 11 10 9 9 9 9 11 11 19 21 10 8 8 8 8 13 12 7 7 6 8 8 8 8 8 8 10 11 11 11 11 15 11 10 10 10 10 10 10 9 8 8 6 6 10 6 8 8 8 8 8 8 7 6 6 6 6 8 8 8 8 8 8 10 12 10 10 9 9 8 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 10 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 11 8 8 6 6 8 6 9 10 10 9 9 9 9 9 9 9 9 9 8 8 8 8 8 8 10 8 9 8 8 8 10 10 10 9 13 10 13 10 10 10 10 13 10 10 8 8 8 8 8 8 8 6 6 8 8 10 10 12 13 10 10 8 13 8 8 8 10 10 10 11 10 10 10 8 10 10 8 8 8 8 8 8 6 6 10 7 8 10 8 8 6 6 6 6 8 8 8 6 6 6 8 8 8 8 8 10 8 8 8 10 10 10 8 8 8 6 6 6 6 8 8 10 8 10 8 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 11 11 8 8 8 8 10 10 6 6 8 8 9 9 8 10 10 9 9 9 9 8 10 8 6 6 6 8 8 10 10 10 8 8 8 8 9 9 9 9 10 8 8 8 8 8 8 11 8 10 10 8 8 8 9 9 9 10 9 9 8 8 8 8 8 8 8 8 8 8 10 9 8 8 10 8 8 8 8 8 6 8 8 8 10 10 9 8 8 8 8 8 8 6 6 6 6 8 6 9 13 16 13 9 9 9 9 9 10 10 12 8 8 8 8 8 8 8 8 8 8 8 8 10 8 7 9 6 6 6 8 8 8 10 8 8 8 10 13 12 19 15 10 8 8 8 8 8 8 10 8 8 8 8 10 9 9 9 10 10 10 11 9 7 7 8 8 8 8 8 8 8 8 8 8 10 7 7 7 11 11 10 8 8 8 8 8 8 11 6 8 6 7 6 7 8 8 8 10 8 8 8 9 9 10 11 13 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 11 10 10 9 9 8 6 6 6 8 6 8 8 8 8 8 8 10 10 10 10 10 13 11 11 11 10 8 8 8 8 8 8 6 6 6 6 6 6 8 8 9 9 9 7 7 8 10 10 8 8 7 7 8 8 8 8 8 8 8 8 6 6 6 7 6 7 7 9 8 9 11 10 10 10 19 17 10 11 8 8 8 8 8 8 10 10 12 8 7 7 7 10 10 8 8 8 8 8 8 8 8 8 8 11 10 8 8 8 8 8 7 7 7 10 12 10 10 8 8 8 8 8 8 10 10 11 10 9 10 10 11 17 10 10 8 8 10 8 8 6 6 6 6 10 8 10 9 8 8 7 8 8 10 11 9 10 8 8 6 8 6 6 10 7 10 10 8 8 8 8 8 8 12 8 8 8 8 8 8 6 6 6 6 8 6 8 8 8 8 8 8 7 7 11 8 8 8 8 10 13 10 8 8 6 6 6 6 6 6 8 8 8 8 8 6 8 6 6 8 8 7 6 6 6 9 10 8 8 9 9 9 9 12 9 9 9 12 10 10 9 8 8 8 9 7 6 6 6 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 11 12 11 11 10 10 10 3 0	Open. Hide. 20 25 30 30 30 30 37 37 35 37 44 41 23 27 11 6 6 6 6 6 6 10 10 10 10 21 21 37 37 41 28 23 10 10 12 26 22 37 37 39 27 27 11 13 21 19 28 28 46 46 46 33 33 36 36 50 38 47 57 42 42 42 37 40 40 47 53 53 53 53 57 42 42 42 48 50 51 48 51 50 50 50 50 68 54 53 50 50 50 53 59 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 50 50 50 50 50 68 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 68 59 48 57 54 54 54 57 57 68 57 57 57 54 54 59 59 59 59 59 59 57 57 57 59 59 57 57 57 57 50 50 57 57 48 48 48 57 48 59 59 59 48 47 47 47 41 37 37 37 32 32 32 37 39 36 37 35 37 28 30 28 30 22 25 34 43 36 28 28 39 39 37 39 33 34 17 21 13 21 21 34 34 32 30 29 37 37 39 39 46 47 47 37 37 35 35 35 39 39 40 39 37 30 32 18 18 18 23 32 23 20 20 30 32 32 32 32 24 24 24 30 30 23 20 25 25 32 24 19 19 16 16 25 25 19 20 20 23 20 19 32 20 28 28 29 24 17 17 14 18 19 19 19 14 17 17 20 22 30 30 20 19 26 18 16 10 14 14 9 9 9 10 11 11 10 10 10 10 14 15 18 16 18 12 12 11 13 11 16 12 14 14 26 27 22 12 15 12 12 12 10 8 8 8 8 10 11 11 17 25 16 8 8 8 8 8 8 8 9 9 15 15 15 12 12 16 11 9 10 10 8 8 6 6 6 8 9 10 10 10 12 11 11 11 17 11 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 9 8 8 11 13 8 8 8 6 8 8 8 8 8 8 8 8 8 10 10 10 10 10 10 14 13 10 9 9 8 9 12 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no374_o13.g1 MSMg01no374_o13.g1 CHROMAT_FILE:
MSMg01no374_o13.g1 PHD_FILE: MSMg01no374_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:18 2005
         (515 letters)



>mm_chr1_139779051_139779966
          Length = 916

 Score =  909 bits (470), Expect = 0.0
 Identities = 502/514 (97%), Gaps = 5/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacatcatgattgagaatttttagaaaagatgggaagcgatgaagaattacacagagcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aacatcatgattgagaatttttagaaaagatgggaagcgatgaagaattacacagagcag 574

                                                                       
Query: 61  aaagtataacctagggtggtgcacaggcttgtccgc--tggtcctggggtcagagcatcc 118
           |||| |||||||||||||||||||||||||||  ||  |||||||||||| |||||||||
Sbjct: 573 aaagcataacctagggtggtgcacaggcttgt--gcaatggtcctggggtgagagcatcc 516

                                                                       
Query: 119 cttccacctcacaagagcacagttccaatacagaagcaggtaagaatggggagctagtgg 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cttccacctcacaagagcacagttccaatacagaagcaggtaagaatggggagctagtgg 456

                                                                       
Query: 179 catacatcatggaccaagtcactggttaggaagaatacattttgtagctgtttagaatat 238
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 455 catacatcatggaccaagtcactggttaggaagaatacattttgtagccgtttagaatat 396

                                                                       
Query: 239 tcca-ttttttctgatagttctggttaggtgtaaaagttacgatcactcagtcagctggt 297
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 395 tccatttttttctgatagttctggataggtgtaaaagttacgatcactcagtcagctggt 336

                                                                       
Query: 298 gttaaagagcaaattagatgctacgatttacagtttaacaaaacaaagtcaatgtctgcc 357
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gttaaagagcaagttagatgctacgatttacagtttaacaaaacaaagtcaatgtctgcc 276

                                                                       
Query: 358 atcccataaaacttcctgcattaagaaagataactttcaaagtcatgccagtttatcttc 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 atcccataaaacttcctgcattaagaaagataactttcaaagtcatgccagtttatcttc 216

                                                                       
Query: 418 ataagtcacatccttggactggagagatggctcaaggatgaagataactggctgctctgt 477
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 215 ataagtcacatccttggactggagagatggctcaaggattaagataactggctactctgt 156

                                             
Query: 478 cacagcacttggattcaattcccagcatccacgt 511
           ||||||||||||||||||||||||||||||||||
Sbjct: 155 cacagcacttggattcaattcccagcatccacgt 122


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 916
Length adjustment: 10
Effective length of query: 505
Effective length of database: 906
Effective search space:   457530
Effective search space used:   457530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information