Query= MSMg01no377_j12.b1 MSMg01no377_j12.b1 CHROMAT_FILE:
MSMg01no377_j12.b1 PHD_FILE: MSMg01no377_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:50 2005
(496 letters)
>mm_chr1_45377311_45378206
Length = 896
Score = 951 bits (492), Expect = 0.0
Identities = 495/496 (99%)
Strand = Plus / Plus
Query: 1 tttattttggcatgacttaagttgattcactgtaaatgactgctgaaatttcaatttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttattttggcatgacttaagttgattcactgtaaatgactgctgaaatttcaatttctt 260
Query: 61 atatataattaagaatcaagtctaaaattttggttgaaggtatttctcttgccatagtaa 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatataattaagaaccaagtctaaaattttggttgaaggtatttctcttgccatagtaa 320
Query: 121 gccacaaatacacaaaccatcattcgtacttcccctattatttttacttattcattgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccacaaatacacaaaccatcattcgtacttcccctattatttttacttattcattgtca 380
Query: 181 atatttgttttaaagtatcactttattttggggcatttggaaaactcttttgttcttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatttgttttaaagtatcactttattttggggcatttggaaaactcttttgttcttgta 440
Query: 241 tgatatacaacacattatgtgatataatactgacccactaatgtccaacagagtgagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatatacaacacattatgtgatataatactgacccactaatgtccaacagagtgagcag 500
Query: 301 tgacattcaacacaaatcagctttgttagttctcccaggacaatatggaagaggtttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacattcaacacaaatcagctttgttagttctcccaggacaatatggaagaggtttata 560
Query: 361 ctgccaagattagctcaatttttccatggatttttgaagtgggttaataaaatccagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgccaagattagctcaatttttccatggatttttgaagtgggttaataaaatccagaag 620
Query: 421 gccccagaattagtaacaaaaggcatccttctagttgaatgttcccatatgttattagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccccagaattagtaacaaaaggcatccttctagttgaatgttcccatatgttattagaa 680
Query: 481 catagaagagcaattg 496
||||||||||||||||
Sbjct: 681 catagaagagcaattg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_j12.g1 MSMg01no377_j12.g1 CHROMAT_FILE:
MSMg01no377_j12.g1 PHD_FILE: MSMg01no377_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:50 2005
(452 letters)
>mm_chr1_45532961_45533812
Length = 852
Score = 735 bits (380), Expect = 0.0
Identities = 423/444 (95%), Gaps = 15/444 (3%)
Strand = Plus / Minus
Query: 1 tgctttttgaccctgtcctctttctcctttttcttctctgtccttttattcttaatctta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 439 tgctttttgaccctgtcctctttctcccttttcttctctgtccttttattcttaatctta 380
Query: 61 tccacaaaattttactgagatatcccagagaactaagaaaggcatttagctgtatttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tccacaaaattttactgagatatcccagagaactaagaaaggcatttagctgtatttcaa 320
Query: 121 cataaaaacct-caaaatatcactttgatattatctgtgattatctgggtagtgttgtgt 179
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cataaaa--ctccaaaatatcactttgatattatctgtgattatctgggtagtgttgtgt 262
Query: 180 ctagagtagttatagcattc-aaaatcttgtaaatctccatatttgggcttctctacctg 238
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctagagtagttatagcattcaaaaatcttgtaaatctccatatttgggcttctctacctg 202
Query: 239 a--------tttttcactttttttggagatttatttgtgtcttgacttaagccagcttcc 290
| ||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaacacttttt---ttttcttggagatttatttgtgtcttgacttaagccagcttcc 145
Query: 291 tattaatgtcaaaacatcttctaaatcctgtagtgagtgagtatttaagcagctttggtc 350
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 144 tattaatgtcaaaacatcttctaaatactgtagtgagtgagtatctaagcagctttggtc 85
Query: 351 ttatccttgttgtatatactcttcgaaaatacaaataaaagtctttgaacatacaaataa 410
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 84 ttatccttgttgtatatactctttgaaaatacaaataaaactctttgaacatacaaataa 25
Query: 411 actatatctatcaggtcttttaaa 434
||||||||||||||||||||||||
Sbjct: 24 actatatctatcaggtcttttaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
