NAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCACAAATCC
GCGGAATTCATATTGCATTCTTATATTTTGCATAGTTGAGAATATATTGA
ACTCATGTTGCCAAACTCATTCTATGAGACAGTTTTATTCATATCCTTCA
CCTGTTTGACTATATTTTCTTGTATTTCTTTATGTTTATTTGCTTCCTCT
TTTAATGCTTTTACTTGCTTGAATGTATTTTCATGTATTTCCTTAAGGAA
TTTATTCATTTCTTCTTTAAAGGCTTTTATTAGCTTCATTAGATTGAATT
TAAAATCCTCTTCTTGTGCTTCAGTTTCATTAGGATATCCAGGGTTTGTT
GTAGAAGGATAGCTGCGCACAACTCACCTCTGTAGGCTGTCCCAGATGGA
TCAATTGGGATAGTGGGCAACTCTTACTGGAATGGGATTGGTTGGGCAGG
GTTCCAAGATCATTAGTTTTGGGGTTCTTGAAGGTTTCCACGGGGAAGTA
GGATTCTCTTGGTTTCCCACAAGACTCCTCTGGACCGAAGAGTGAGTCCA
GAGCTAGACAATGTAGCTCAAGGGACCATGTGCCACCCCCTGAGATTGTT
CTTTATAGGTGAAAATGACCACAAGACTTTGTGTTATTGGAGAGTGACTA
GACCCAAAAAATTCCCTTTATTTCTTCGGGGTTGATACTACCAAAACCAC
CCAGAAAAAAATAAAACATGTTGGTAAATTTTATAAAAAAAGTAACATTG
GTCCATTGGTATAAATTTTTAAAAAGGGG

CGATGCTGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGGCCATTTAGAAGTTTCAGAAATTCA
AACCACAGTTAGAAACCTGAATTATTCTTTTCCTCTGAGAAGGTCAAAGA
TTATGGCTGGGAATGTCTGCTGGGTATCTAAGTAATGACATGTACTTACA
CTGGTGGAGAGAAATTATTTAAAAAATTATTTTTATTATTTAGTGTGTGA
TTTTGCTGCATGCATATATGCATCATGTGTGTGCAGTAACCCAGGAGACC
AGGAGAGGACATTGGATCCCATAGGACTGCAGTTATATATGGTTGTACTG
TAGATGCTGGGAATTGAACCTGGGTTCTCTGTAAGAATAGCCAGTGCTCT
TAATCACTGAGGTATCTCTCCTGTACCACCAGCGTATTTCTAAGGGATAA
GAGGACCATGTGATGACGGGTCTGGCCTTGAGGACATTGGAAAAGACTGA
GCCATAAGGCTTCCTGCCTCCAAGTGAGGAGCTCTCTGATAAAAGGTTGG
AGGATACTATAGAGGGCGCTGCTGAAGGACAGGGTGGAGGTGGAGTAAAA
ACCTCTACCATAGGAAACATCCTGAGAGGGAACTCTTGATGAGTTCTGTA
GAAAGAAGGAAAAATCTCCTTTTTCCTACCCACCCCCAACATGCAGTTTC
ATTTTATTTTTTCAAACCTTTTTTAAAATGGGTCTTTAATAACTTAAATC
CCCCTCCCCCCCCCCG

Query= MSMg01no378_b09.b1 MSMg01no378_b09.b1 CHROMAT_FILE:
MSMg01no378_b09.b1 PHD_FILE: MSMg01no378_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
         (505 letters)



>mm_chr1_85234509_85235413
          Length = 905

 Score =  917 bits (474), Expect = 0.0
 Identities = 495/502 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcatattgcattcttatattttgcatagttgagaatatattgaactcatgttgcc 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatattgcatccttatattttgcatagttgagaatatattgaactcatgttgcc 263

                                                                       
Query: 64  aaactcattctatgagacagttttattcatatccttcacctgtttgactatattttcttg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaactcattctatgagacagttttattcatatccttcacctgtttgactatattttcttg 323

                                                                       
Query: 124 tatttctttatgtttatttgcttcctcttttaatgcttttacttgcttgaatgtattttc 183
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 tatttctttatgtttatttgcttcctcttttaatgcttttgcttgcttgaatgtattttc 383

                                                                       
Query: 184 atgtatttccttaaggaatttattcatttcttctttaaaggcttttattagcttcattag 243
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 384 atgtatttccttaaggaatttattcatttcttctttaaagacttttattaccttcattag 443

                                                                       
Query: 244 attgaatttaaaatcctcttcttgtgcttcagtttcattaggatatccagggtttgttgt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attgaatttaaaatcctcttcttgtgcttcagtttcattaggatatccagggtttgttgt 503

                                                                       
Query: 304 agaaggatagctgcgcacaactcacctctgtaggctgtcccagatggatcaattgggata 363
           |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agaaagatagctgcacacaactcacctctgtaggctgtcccagatggatcaattgggata 563

                                                                       
Query: 364 gtgggcaactcttactggaatgggattggttgggcagggttccaagatcattagttttgg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgggcaactcttactggaatgggattggttgggcagggttccaagatcattagttttgg 623

                                                                       
Query: 424 ggttcttgaaggtttccacggggaagtaggattctcttggtttcccacaagactcctctg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggttcttgaaggtttccacggggaagtaggattctcttggtttcccacaagactcctctg 683

                                 
Query: 484 gaccgaagagtgagtccagagc 505
           |||| |||||||||||||||||
Sbjct: 684 gaccaaagagtgagtccagagc 705


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)