Query= MSMg01no378_h12.b1 MSMg01no378_h12.b1 CHROMAT_FILE:
MSMg01no378_h12.b1 PHD_FILE: MSMg01no378_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:58 2005
(521 letters)
>mm_chr1_149768571_149769492
Length = 922
Score = 632 bits (327), Expect = 0.0
Identities = 336/339 (99%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 184 acactcctccattgttggtgggatcgcaagcttttacaaccactctggatatcagtttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 acactcctccattgttggtgggatcgcaagcttttacaaccactctggatatcagtttgg 863
Query: 244 tggttccttagaaaattggacatagtactactggaggatccagcaatacctcttctgggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tggttccttagaaaattggacatagtactactggaggatccagcaatacctcttctgggc 803
Query: 304 atatatccagacgatgccccaactggtataggccttttttaatcctaacaataaaatgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atatatccagacgatgccccaactggtataggccttttttaatcctaacaataaaatgaa 743
Query: 364 atttaaaaataaatatttttccacttaatttgtactttttatttaatctaagtccctgta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 atttaaaaataaatatttttccacttaatttgtactttttatttaatctaagtccctgta 683
Query: 424 ccataaaatggtttcacctatattgatagtctgtatttctacttcaaataaa-tcttggg 482
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 682 ccataaaatggtttcacctatattgatagtctgtatttctacttcaaataaacactaggg 623
Query: 483 gaggagctctgcagacatacctacaagtgtatctcttag 521
|||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaggagctctgcagacatacctacaagtgtatctcttag 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_h12.g1 MSMg01no378_h12.g1 CHROMAT_FILE:
MSMg01no378_h12.g1 PHD_FILE: MSMg01no378_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:58 2005
(500 letters)
>mm_chr1_149695844_149696743
Length = 900
Score = 928 bits (480), Expect = 0.0
Identities = 495/500 (99%)
Strand = Plus / Plus
Query: 1 ttcatttttatgataacaaatacaagggagtaaaattattcaaatttgagcatttctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatttttatgataacaaatacaagggagtaaaattattcaaatttgagcatttctttc 260
Query: 61 cacagttttgggaatgtaaatttatattcctcttaaagaagctaatgatgttgcaggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagttttgggaatgtaaatttatattcctcttaaagaagctaatgatgttgcaggcag 320
Query: 121 ggaaaatatcctacgtgtcttaacaaaaacagacaggaattgtgctgagaaatatgatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaatatcctacgtgtcttaacaaaaacagacaggaattgtgctgagaaatatgatgt 380
Query: 181 tgtatcataaattcagtttatttttgtcaaaatagaagaaaatctagccaatcttttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatcataaattcagtttatttttgtcaaaatagaagaaaatctagccaatcttttaaa 440
Query: 241 tatcataggattatggccaattctatcagcttctatgctcaatttgtttaatctctgtaa 300
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcaaaggattatggccatttctatcagcttctatgctcaatttgtttaatctctgtaa 500
Query: 301 ataaattttaactaattctatttttctgtcagttccacagccaacaagtttttaagattc 360
|||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 ataaatcttaactaatcctatttttctgtcaggtccacagccaacaagtttttaagattc 560
Query: 361 attgtctaccatatgttactacaaaaaagttttccagaaggagatttgaattttgagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attgtctaccatatgttactacaaaaaagttttccagaaggagatttgaattttgagatc 620
Query: 421 agagtcttatctatccatatgtgaaaaacatctgctcttccttaaggacagccaatgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagtcttatctatccatatgtgaaaaacatctgctcttccttaaggacagccaatgtct 680
Query: 481 atgttaagtatctattcagg 500
||||||||||||||||||||
Sbjct: 681 atgttaagtatctattcagg 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
