NTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCCAACAAGGCTAAAGAAGCCACTGTTGTAGGGTAATGATCTAA
TGTCCTCCCAGTGTATATTTTGGAATGGATCCATAACAATGGGCCTTCTT
GCCAGAATAATCCTGTGGGTTGCATCTCAGTAATTTTATCAAAATGATGG
GTAACCCTTCTCTACAATGCTGAAGCTTTACTTTAATCAATTATTCTTCA
ACCAGGGTAAGGGCCTTTCTAGCCTCAGGTGTTAATTCCCTTTTGGAACT
TAACTCTGATTCTCCTTCTATAATTTGAAACAGAGTTTTTAATTTAACAA
TTGGGATCTTCAAATAGGGCCAAATCCAATTGATATCGCCTAACAATTTC
TGAAAATCATTTAAAGTATGCAAGGAATCAACCCTCAACTATATCTTTTG
AGGCCAAACGGCCGTATGGGTGATCCTTGCTCCTAAACAGGACACTATTT
TCAACAAATCCTGACCCCATAAGGTAATGGGCAGCTCAAGCACATATGGT
TGAAACATCCCATCATGCCCTTCCTTATCTTTCCAAGGGAGCATCCTGGC
ACTTATGTCTGGGCTCTTTGCATAGCCCAGGCCTGATAATATTTGTTCTG
ACTCCTGAATCGGNCATCCTTTTGGNCAGTCCCTTAAACAAAAGGCAGTA
AGAAAAGTTACCCACTGGGCATGAAAAAAAGTTAACCTTAAAACGTCCCT
ATTACCTCCTTGGT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAACTGGGGTCCTCTTCAAGAGC
AGCACATGCTGATAATTGCTGCCTTATATCTATCTCTATAATTCTGAGAG
TATGCTATTTTGAATACAACAAATGCTTCTTCCTTAAAATTCTTTTTGAT
TATTTTTAATTGACTTAAACAATCTACCACTTGTAAAAAAAAGAAATGGG
TAAACGAAACATTTTGGAACACTGAGATGATACAACTTAAACTACAGCTT
AAAAGCATTTTGTTTGTTGATGTTTGATGTTTGCTTTAATGTACTTAATG
TATAATATAATATATATTTTTACTACTATTCTTGAGAAAATTTCTTAGGA
GCCTAGCAGCCTAGAAAAAATATAGATTAATATAAGTTAATAATAAAAAT
AATTATAAGATAATTTCAATATAAATTAATATATTGAATAAATATATTTA
CCTAATTTATTTGAAAAATAGATATTTCTTATCAGAAATAATCAAGTAAA
AGCTTCCTGTGTCCAGTTGCATCAGTTATGAAATTACATAATATTTTTTA
AATCTGCTTAACAAATGGAAGTAAAATATAAAACTCTGGATTTCTTAATC
TCCTTCTAAGAGAAAACTGTAGCTTTCTGATTTACATCGCTGGAGAATAA
GAGATCCGCTTCTCCTTTTGGTTTCCTAAATGGCTTAATCCGAAGAAANA
ATAGACTTTGG

Query= MSMg01no378_n04.g1 MSMg01no378_n04.g1 CHROMAT_FILE:
MSMg01no378_n04.g1 PHD_FILE: MSMg01no378_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:24 2005
         (565 letters)



>mm_chr1_149152632_149153596
          Length = 965

 Score = 1069 bits (553), Expect = 0.0
 Identities = 562/565 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactggggtcctcttcaagagcagcacatgctgataattgctgccttatatctatctcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactggggtcctcttcaagagcagcacatgctgataattgctgccttatatctatctcta 260

                                                                       
Query: 61  taattctgagagtatgctattttgaatacaacaaatgcttcttccttaaaattctttttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattctgagagtatgctattttgaatacaacaaatgcttcttccttaaaattctttttg 320

                                                                       
Query: 121 attatttttaattgacttaaacaatctaccacttgtaaaaaaaagaaatgggtaaacgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attatttttaattgacttaaacaatctaccacttgtaaaaaaaagaaatgggtaaacgaa 380

                                                                       
Query: 181 acattttggaacactgagatgatacaacttaaactacagcttaaaagcattttgtttgtt 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 acattttggaacactgagatgatacaccttaaactacagcttaaaagcattttgtttgtt 440

                                                                       
Query: 241 gatgtttgatgtttgctttaatgtacttaatgtataatataatatatatttttactacta 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgtttgatgtttgctttaatgtatttaatgtataatataatatatatttttactacta 500

                                                                       
Query: 301 ttcttgagaaaatttcttaggagcctagcagcctagaaaaaatatagattaatataagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcttgagaaaatttcttaggagcctagcagcctagaaaaaatatagattaatataagtt 560

                                                                       
Query: 361 aataataaaaataattataagataatttcaatataaattaatatattgaataaatatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aataataaaaataattataagataatttcaatataaattaatatattgaataaatatatt 620

                                                                       
Query: 421 tacctaatttatttgaaaaatagatatttcttatcagaaataatcaagtaaaagcttcct 480
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacccaatttatttgaaaaatagatatttcttatcagaaataatcaagtaaaagcttcct 680

                                                                       
Query: 481 gtgtccagttgcatcagttatgaaattacataatattttttaaatctgcttaacaaatgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtccagttgcatcagttatgaaattacataatattttttaaatctgcttaacaaatgg 740

                                    
Query: 541 aagtaaaatataaaactctggattt 565
           |||||||||||||||||||||||||
Sbjct: 741 aagtaaaatataaaactctggattt 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)