XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTCAGCTTTCTCCCTTGCTTTTAATCACTTGATGTCTTAGTTAGAATTG
CCTTTGCTATAAAGAGATACCATGACCTAGGGAACTTTTATAAAGGAAAA
CATTTACTTGCAGCTAGTTTATAGTTTAAGAGGTTCAGTCCACTCTCATC
ATGGCTGGAGTCAGGACAGTGCCCAGAAGACATGGTTCTGGAAGAGCAGA
GAGTTCTATATCTTGACCAAAGACAGCCAGAAGGCTTGCATCCTCAGCTG
GTTAAGAGGAAGCTCTCTTCTGAAATGGGAGTAGGAGACCTCCAAAGCCC
ACCCAGTCAGTGGTACACTTCATCCAACAGGGCCACACCTCTTAACAGTA
CCACTTCTTATGGATCAAGCATACTCAAACCACTATGCTTGATATCAAGA
AAAGAGGTGTATTCAGCCTACCAATATCCTAACCCCCCTTAGTCCCTCAA
CCCCTACCCTATAGTCCTCAATTTCCTCTTCTCCAAGCAACCCAGAATTC
CTTTCTCCTATCTCCCCAGTACCTACCACCACCCTCTCCTCACTCATTGT
AAACAGCATCCTGCTTCCTACCCCAATTCCTCTCTTGCCATATTCCTTCC
TCATCCTTGCTCCCCTACCCAACAGTATCCCTCCCACACATATGTATCTA
TGATTATATTGAGACAATTTTTAGGACCCTATGTACCAA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCCAACTGAGGAATATCAAATGGCTGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCTGGGAAATGCAAATCAA
AACAACCCTGAGTTTCCACCTCACGCCAGTCAGAATGGCTAAGATCAAAA
ATTCATGTGACAGCAGATCCTGGTGAGGATGTGGAGAAAGAGGAACACTC
TTCCATTGTTGGTGGGGTTGCAAGCTTGTACAAGCACTCTGGAAATCAGT
CTGGCAGTTCCCCAGACAACTAGACATAGTTTTACTAGAGGATCCAGCAA
TACCTCTTCTGGGCATATACCCAGAAGACGTTCCAATTGGTAGTAAGAAC
ACATGCTCCACTGTTTCCATAGCAGCCTTATTTATAATAGCCAGAAGCTG
GAAAGAATCCAGATGTCCCTAAACAGAGGAATGGATAAAGAAAATGTGGT
ACCTTTATACAATGGAGTACTACTCAGCTATTAAAAACAATGAATTTATG
AAATTCCTAGGCAAATGGATAGATCTGGAGGGTAACATCCTGAGCGAGAT
AACCCAATCACAAAAGAAATCACATGATATGCACTCAATAATAATTGGAA
TATAGCCCTATCACTTACAATTTCCAAGGCACAATTTGGAAAACATATCA
CAACCTGGACATTTTTGCCCCTCTTAAAATTGGTAACCAAACACCCA

Query= MSMg01no379_e03.b1 MSMg01no379_e03.b1 CHROMAT_FILE:
MSMg01no379_e03.b1 PHD_FILE: MSMg01no379_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:58 2005
         (555 letters)



>mm_chr1_149418692_149419646
          Length = 955

 Score =  961 bits (497), Expect = 0.0
 Identities = 539/553 (97%), Gaps = 1/553 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcctcagc-tttctcccttgcttttaatcacttgatgtcttagttagaattgcct 62
           ||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 203 ggaattcctcagcttttgtcccttgctttttattacttgatgtcttagttagaattgcct 262

                                                                       
Query: 63  ttgctataaagagataccatgacctagggaacttttataaaggaaaacatttacttgcag 122
           |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgctataaaaagataccatgaactagggaacttttataaaggaaaacatttacttgcag 322

                                                                       
Query: 123 ctagtttatagtttaagaggttcagtccactctcatcatggctggagtcaggacagtgcc 182
           ||||  |||||||||||||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 323 ctagcctatagtttaagagggtcagtccactatcatcatggctggaatcaggacagtgcc 382

                                                                       
Query: 183 cagaagacatggttctggaagagcagagagttctatatcttgaccaaagacagccagaag 242
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cagaagacatggttctgaaagagcagagagttctatatcttgaccaaagacagccagaag 442

                                                                       
Query: 243 gcttgcatcctcagctggttaagaggaagctctcttctgaaatgggagtaggagacctcc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcttgcatcctcagctggttaagaggaagctctcttctgaaatgggagtaggagacctcc 502

                                                                       
Query: 303 aaagcccacccagtcagtggtacacttcatccaacagggccacacctcttaacagtacca 362
           |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaagtccacccagtcagtggcacacttcatccaacagggccacacctcttaacagtacca 562

                                                                       
Query: 363 cttcttatggatcaagcatactcaaaccactatgcttgatatcaagaaaagaggtgtatt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cttcttatggatcaagcatactcaaaccactatgcttgatatcaagaaaagaggtgtatt 622

                                                                       
Query: 423 cagcctaccaatatcctaaccccccttagtccctcaacccctaccctatagtcctcaatt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cagcctaccaatatcctaaccccccttagtccctcaacccctaccctatagtcctcaatt 682

                                                                       
Query: 483 tcctcttctccaagcaacccagaattcctttctcctatctccccagtacctaccaccacc 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcctcttctccaagcaacccagaattcctttctcctatctccccagtacctaccaccacc 742

                        
Query: 543 ctctcctcactca 555
           |||||||||||||
Sbjct: 743 ctctcctcactca 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)