Query= MSMg01no379_e12.b1 MSMg01no379_e12.b1 CHROMAT_FILE:
MSMg01no379_e12.b1 PHD_FILE: MSMg01no379_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:00 2005
(545 letters)
>mm_chr1_131484482_131485426
Length = 945
Score = 1038 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Minus
Query: 1 ctaacattcatactcaggccacagcacatacattcccaacaacccctttccccacacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctaacattcatactcaggccacagcacatacattcccaacaacccctttccccacacaca 686
Query: 61 tttgctcattttacaacccataaaatgctgtattgatattaaagtcatccttcaaaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttgctcattttacaacccataaaatgctgtattgatattaaagtcatccttcaaaaagc 626
Query: 121 acaaccgtgtcctgtatgatatgcatgctcaaatatttcaataaccccataacttagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaaccgtgtcctgtatgatatgcatgctcaaatatttcaataaccccataacttagcaa 566
Query: 181 caagaattaggaggcagaaaacacaatttcattgtgatgggtgtgatcaggtcttctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caagaattaggaggcagaaaacacaatttcattgtgatgggtgtgatcaggtcttctgag 506
Query: 241 tgtccttcctgtttgtccatgaaaccatgagaaatgtctggatgggatgtgtacacctta 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtccttcctggctgtccatgaaaccatgagaaatgtctggatgggatgtgtacacctta 446
Query: 301 ctgaactgagcacaaacattgctaccatccccagctcactctctgtgacagttttgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaactgagcacaaacattgctaccatccccagctcactctctgtgacagttttgtttg 386
Query: 361 acactaatagtacattgtaaacccacttcatctctatggacagatgtcattgacttaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acactaatagtacattgtaaacccacttcatctctatggacagatgtcattgacttaaaa 326
Query: 421 gcaaagcacctctgttatttatcactttttattacaaattatcagttgctagtggataca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcaaagcacctctgttatttatcactttttattacaaattatcagttgctagtggataca 266
Query: 481 ggatccattaaaaggagcaggagagcacaaacagacagaaatatatctgttctttgctac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggatccattaaaaggagcaggagagcacaaacagacagaaatatatctgttctttgctac 206
Query: 541 caaca 545
|||||
Sbjct: 205 caaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_e12.g1 MSMg01no379_e12.g1 CHROMAT_FILE:
MSMg01no379_e12.g1 PHD_FILE: MSMg01no379_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:00 2005
(172 letters)
>mm_chr1_131328961_131329531
Length = 571
Score = 325 bits (168), Expect = 9e-94
Identities = 171/172 (99%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 1 caatactactttagtgatttgtgttttccccacacacagtagcattacaagctttagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatactactttagtgatttgtgttttccccacacacagtagcattacaagctttagaga 260
Query: 61 tagtttttaaggcaccattgcatttcaatacaggggagtatattgttttaatcacagaag 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtttttaaggcaccat-gcatttcaatacaggggagtatattgttttaatcacagaag 319
Query: 121 ttgaaagctgtgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgaaagctgtgtgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtg 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 571
Length adjustment: 8
Effective length of query: 164
Effective length of database: 563
Effective search space: 92332
Effective search space used: 92332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
