ATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCGGAA
TTCAAGAATTCCCTCAACAGTTTCAAAACAGAAGAATCTAAATAGGCAGC
ATTGAATTTCCATTCATTTTTCCATTTATTGAAGAATAAAGAGATGGGAT
ATGAGTGGTTGCCTAATATTACAGGCTCTCTATTGATTGGTTCCCTGCCC
TTTCACCTTATTTTCCTTAGCCAATCAGGGCCCACAAAAGTCTATGTAAA
GTCCTGAGAACCACCTTTGCATCAACCTGGCTCTTCTATTACTTTGTTGA
CCCAGCAAACCAGATTTTTTTAGAATTTTTTCTTTGACCTGTCAGTGGTG
CTGTATCTGGGGTCAGTAGACACTTGTTTCTTTCTCCTCAGAAAAAGTCA
TGCTACACAACTGGCACCCAAACAGGGACTGACAGGGCCAAAGCTGAGTC
AGGGAGGAGTAGATGCAAGCCCTCTACAAGTGGTTGATAAGACATGCAAC
TGAACTGATCTGACAGTGGAGCTTCAGGAGAAACAATTTTGATATGATCA
AATGGTGATTCTCTATGTGGGCCAGGATGGTATGCTCCATACTGTGTCAG
CTTCATGCTCTCTGATTGATAAGACATGCAACCAAACTCAAGCTGTCTGA
TATTGTATTATCCTTGGAGGAAACCTCCAGGCGTCTTTCTCCTCCCCCTC
CTCCTTTCACTCCTCCTTCTTCTCCTCTTTCT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGCTTTTTTTCAGTTCTTTTCATCTCAG
AGCTTATTGCTACGATGCTGGCCTGTGGGGGACATATACTGGTTTCTGGA
TCTCTCATTGCTGGGGAATCAAGTACAATGTACTCAGCACTACACAGGAA
GAACTGTGGTGGAAAAAAGCTACAAATCGAGGAGAGGAGTAGATAAATAA
GGCACAAAAAAACCCAAGCCTGATGCGCTACTCTTGGGAGGCAGAAACAG
GATGAGCATCCCAAGGTTGAAACCAAGTGGTCTACAGAATGAGACTCTGA
CTCAAGGCAAACAAAGGAAAATACAACAATGCTAGACTTGAATCAGGCAA
GGCATAATGGGGGCAGGGTCGGTGAGCATGGTGAGAGATGGTTCTAGAAG
GTAGAGAGCAGGGCTCATATGGGTTTGAAGGCAATTGATGAAGATTTTGA
CTTTACTGTAAGAGCAATGGGATGCCCATGAACAATTTTAGCATGGATTG
GATGTGATCAGAGTAGCATTTTATATTTCTACCCTCTTAATAGGGGTACC
ATACCCTTGCAGTTTTCTTTTCTATCATACCGGAAACATTATATTTTGCC
GCTGTGTTTTTTCTCGCCGTTTTTTTTTTCGTTTTCCCCCCCTCTTTCTC
ACCTTCCCCATTAACTCGCTTTCGCGCTATTTTCCCTTTTTTATCCTCCT
CCTC

Query= MSMg01no379_i06.g1 MSMg01no379_i06.g1 CHROMAT_FILE:
MSMg01no379_i06.g1 PHD_FILE: MSMg01no379_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:18 2005
         (434 letters)



>mm_chr1_159422593_159423425
          Length = 833

 Score =  787 bits (407), Expect = 0.0
 Identities = 428/435 (98%), Gaps = 3/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctttttttcagttcttttcatctcagagcttattgctacgatgctggcctgtggggga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tgctttttttcagttcttttcatctcagagcttattgctacgatgctggcctgtgaggga 260

                                                                       
Query: 61  catatactggtttctggatctctcattgctggggaatcaagtacaatgtactcagcacta 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 catatactggtttctggatctctcattgctggggaatcaagtacgatgtactcagcacta 320

                                                                       
Query: 121 cacaggaagaactgtggtggaaaaaagctacaaatcgaggagaggagtagataaataagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaggaagaactgtggtggaaaaaagctacaaatcgaggagaggagtagataaataagg 380

                                                                       
Query: 181 cacaaaaaaacccaagcctgatgcgctactcttgggaggcagaaacaggatga-gcatcc 239
           ||| |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Sbjct: 381 cac-aaaaaacccaagccagatgcgctactcttgggaggcagaaacaggatgaag-atcc 438

                                                                       
Query: 240 caaggttgaaaccaagtggtctacagaatgagactctgactcaaggcaaacaaaggaaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caaggttgaaaccaagtggtctacagaatgagactctgactcaaggcaaacaaaggaaaa 498

                                                                       
Query: 300 tacaacaatgctagacttgaatcaggcaaggcataatgggggcagggtcggtgagcatgg 359
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cacaacaatgctagacttgaatcaggcaaggcataatgggggcagggtcggtgagcatgg 558

                                                                       
Query: 360 tgagagatggttctagaaggtagagagcagggctcatatgggtttgaaggcaattgatga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgagagatggttctagaaggtagagagcagggctcatatgggtttgaaggcaattgatga 618

                          
Query: 420 agattttgactttac 434
           |||||||||||||||
Sbjct: 619 agattttgactttac 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 833
Length adjustment: 9
Effective length of query: 425
Effective length of database: 824
Effective search space:   350200
Effective search space used:   350200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)