Query= MSMg01no379_l07.b1 MSMg01no379_l07.b1 CHROMAT_FILE:
MSMg01no379_l07.b1 PHD_FILE: MSMg01no379_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:32 2005
(454 letters)
>mm_chr1_154339201_154340054
Length = 854
Score = 824 bits (426), Expect = 0.0
Identities = 446/454 (98%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 1 tcaagcaaagccttgcaccatgaatttatattttaacagagacataggtaatatattaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tcaagcaaagccttgcaccatgaatttatattttaacagagacataggtaatatattaag 263
Query: 61 gaagcagttgcatgaatctttgggggatgaattccaagcagaaagaacaatacatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaagcagttgcatgaatctttgggggatgaattccaagcagaaagaacaatacatataaa 323
Query: 121 gaccactagagagaagaaaccttgggagtggtccagggccaggggccaacatggtgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaccactagagagaagaaaccttgggagtggtccagggccaggggccaacatggtgagga 383
Query: 181 acaaggagctggatagaaggagatgaagtcatggatgaacgcagaacataccagccatgg 240
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acaaggagctggat---aggacatgaagtcatggatgaacgcagaacataccagccatgg 440
Query: 241 caaggaatttggattttatcctaagagcaacgtgagcccataagatggtgtgatgtgatt 300
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 441 caaggaatttggattttatcctaagagcaacatgagtccataagatggtgtgatgtgatt 500
Query: 301 ttatgtattttaaaaggtcactcaagctgtggtatgggtattagagtataaggaattaat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatgtattttaaaagatcactcaagctgtggtatgggtattagagtataaggaattaat 560
Query: 361 acatagctcatgttaagagatgttagtggttgagatttgagctgtggcaagaaggtaatg 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatagttcatgttaagagatgttagtggttgagatttgagctgtggcaagaaggtaatg 620
Query: 421 agaaacagacaggcttaaggtacattttaatggc 454
||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaacagacaggcttaaggtacattttaatggc 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_l07.g1 MSMg01no379_l07.g1 CHROMAT_FILE:
MSMg01no379_l07.g1 PHD_FILE: MSMg01no379_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:32 2005
(353 letters)
>mm_chr1_154536108_154536860
Length = 753
Score = 619 bits (320), Expect = 0.0
Identities = 344/352 (97%)
Strand = Plus / Minus
Query: 1 tggctatgctattgattctggtgatgtcaagttagaacccattatgaagtgccataaggc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 552 tggctatgctattgattctggtgatgtcaagttagaatccattatgaagtgccataaggc 493
Query: 61 caattgtcatggagtcgtccatgcgcttaatgagtgatggctgttgtgttggggtggggt 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 492 caattgtcatggagtcgtccatgtgcttaatgagtgatggctgttgtgttggggtggggt 433
Query: 121 aacaagaggaggaaagggggtgttctgggtgtaagagaccacaggcaccaaggcatggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aacaagaggaggaaagggggtgttctgggtgtaagagaccacaggcaccaaggcatggga 373
Query: 181 ggtcacagtttcagaacaaggctcttgggcagtgtatgggcgtagggaagtcggagtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggtcacagtttcagaacaaggctcttgggcagtgtatgggcgtagggaagtcggagtagg 313
Query: 241 gtggagtaaacatatgatctaaaggttaggggttggtcagtcggttgatcagtcggatca 300
|||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 312 gtggagtaaatatatgatctaaaggttaggggttggtcggtcggttggtcagtcggatca 253
Query: 301 cggaggactgcgctgtgccctgtggtggcgcattcctactgcagattcctaa 352
|||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 252 tggaggactgcactgtgccctgtggtggcgcattcctactgcaggttcctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
