XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TGTTCTGCTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTTTCTGAAG
TCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGA
TTTAGGATATGTAAAGATCCATTCCCAATCTGTTGGTGGTCTTTTTGTCT
TGTTGACGGTGTCTTTAGCCTTGCAGAGACTTTGGAGTTTCATTAGGTCC
CATTTGTCAATTCTCAATCTTACAGCACAAGCCATTGCTGTTCTGTTCAG
GAATTTTTCCCCTGTGCGCATATCTTCAAGGCTTTTCCCCACTTTCTCCT
CTAGAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTA
GATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCT
ACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTT
TCTTCCACTGAATGGTTTTAGCTCCCTTGTCCAAGATCAAGTGACCATAG
GTGTGTGGGCTCATTTCTGGCCCCTTTATTCTATTCCATTGGTCCACAGG
TCCTGTCTCTTTTCCTGCACCATGTCATTTTTTCCACTATTGCTCCCTCC
CACCTTTTTCATTCTCCTTGCCGGCTCCCCCTATACCTTCTTCCTTTTTT
TACCTATCTATTTTCTTTTCCACCCCTTTTTCTTTTCCTTCTCCAACCTC
CTTTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATTTTGTTATCCATTTATCTGTACTTGTGT
ATTTATTTCTGTAAAGACTTAAAGATTAAGAATTAAATACTGAATTTTAA
GAAATAAACATCTAAATAATATAAAAATAAAATGTTATAGTATTGAAAAA
ATATGATTGAGCAATCTTTATCAGCACATCGTATTCTAAAGTGTTAGTTT
GCTTACATTCCAGCTCCTGCCAAACACTGTCCTATTTCATGCATCTATGA
CTTTGTCATTGCAAAAAATGTTGATGTATGGGAATGGGGTTGTAGACAGA
AGCATAAAAGCTGGTGATAACAACTATAGTGGCTAACAAAGAGAAGTGGC
ACTTTAGAAATTCAGAGGTTTATGAAGTGCTGTTATTTTAAGTGTGTGCA
AAGCACATATATGTACATATATGTGGTGACTAGAGATCACACTCAGATAT
AATTTTCAAGAGCTATACCTCTTGTTCTTTGAGACAGACTCTCCCATGCT
TTGAATACACAAAACAGGCTATTGCTGTTTGGCCAGTGAGCCTCAATGAT
CCTTTTGTCTTTTCCCCCACTAACGCTGGGTTTTCCCCGTGTGTATTACG
ACTCCTGGGCCACCTTTCGCCAGTCTCACCTCTGCTTTTTTTTTGTTCCC
TATTAATCCCTTCTCCGCAAATACCCTTTTTCTTTCCCCCCTTTTCCACC
CCCCCTGGTCTCACTTN

Query= MSMg01no379_l19.g1 MSMg01no379_l19.g1 CHROMAT_FILE:
MSMg01no379_l19.g1 PHD_FILE: MSMg01no379_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:34 2005
         (448 letters)



>mm_chr1_115682870_115683717
          Length = 848

 Score =  820 bits (424), Expect = 0.0
 Identities = 440/448 (98%), Gaps = 5/448 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattttgttatccatttatctgtacttgtgtatttatttctgtaaagacttaaagattaa 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 206 cattttgttatccatttatctgtacttgtgtttttatttctgtaaagacttaaagattaa 265

                                                                       
Query: 61  gaattaaatactgaattttaagaaataaacatctaaataatataaaaataaaatgttata 120
           |||||||||||||||||||||||||||||||||||||||||||||||||     ||||||
Sbjct: 266 gaattaaatactgaattttaagaaataaacatctaaataatataaaaat-----gttata 320

                                                                       
Query: 121 gtattgaaaaaatatgattgagcaatctttatcagcacatcgtattctaaagtgttagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 gtattgaaaaaatatgattgagcaatctttatcagcacatcgtattctaaactgttagtt 380

                                                                       
Query: 181 tgcttacattccagctcctgccaaacactgtcctatttcatgcatctatgactttgtcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcttacattccagctcctgccaaacactgtcctatttcatgcatctatgactttgtcat 440

                                                                       
Query: 241 tgcaaaaaatgttgatgtatgggaatggggttgtagacagaagcataaaagctggtgata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcaaaaaatgttgatgtatgggaatggggttgtagacagaagcataaaagctggtgata 500

                                                                       
Query: 301 acaactatagtggctaacaaagagaagtggcactttagaaattcagaggtttatgaagtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaactatagtggctaacaaagagaagtggcactttagaaattcagaggtttatgaagtg 560

                                                                       
Query: 361 ctgttattttaagtgtgtgcaaagcacatatatgtacatatatgtggtgactagagatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgttattttaagtgtgtgcaaagcacatatatgtacatatatgtggtgactagagatca 620

                                       
Query: 421 cactcagatataattttcaagagctata 448
            |||||||||||||||||||||||||||
Sbjct: 621 aactcagatataattttcaagagctata 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space:   367044
Effective search space used:   367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)