Query= MSMg01no380_b16.b1 MSMg01no380_b16.b1 CHROMAT_FILE:
MSMg01no380_b16.b1 PHD_FILE: MSMg01no380_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:04 2005
(444 letters)
>mm_chr1_134702409_134703250
Length = 842
Score = 826 bits (427), Expect = 0.0
Identities = 437/441 (99%), Gaps = 2/441 (0%)
Strand = Plus / Plus
Query: 4 ggaattctggggattccattaccttggttgtctgagagaggtggagccagatgctggaaa 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggggatgctattaccttggttgtctgagagaggtggagccagatgctggaaa 263
Query: 64 atcaccaaaatactagaaaaatccttgagggggtcccaagagccacatggcactaaatac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcaccaaaatactagaaaaatccttgagggggtcccaagagccacatggcactaaatac 323
Query: 124 aagctggctggtgtattacagctctgaggagaaaggcttgtccaatggaagtgttatagc 183
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagctggctggtgt--tacagctctgaggagaaaggcttgtccaatggaagtgttatagc 381
Query: 184 tctgcagggaggatggtttccctaatgcaagcattacagctctgaaggggaaagcatcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctgcagggaggatggtttccctaatgcaagcattacagctctgaaggggaaagcatcct 441
Query: 244 ggcagtcgggagccaaggacaccacaaaagtcacaccacacaacaaacctcacacaagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggcagtcgggagccaaggacaccacaaaagtcacaccacacaacaaacctcacacaagag 501
Query: 304 ggtggctgcctctgctccttggagaagcaacagagaactgggcaggaggcaggtttgtat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggtggctgcctctgctccttggagaagcaacagagaactgggcaggaggcaggtttgtat 561
Query: 364 ggggtttcttgagggtagagatttccaggctggggattggtgggatttcaagacaagtcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggggtttcttgagggtagagatttccaggctggggattggtgggatttcaagacaagtcc 621
Query: 424 acagattgatgggatttcaag 444
|||||||||||||||||||||
Sbjct: 622 acagattgatgggatttcaag 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 842
Length adjustment: 10
Effective length of query: 434
Effective length of database: 832
Effective search space: 361088
Effective search space used: 361088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_b16.g1 MSMg01no380_b16.g1 CHROMAT_FILE:
MSMg01no380_b16.g1 PHD_FILE: MSMg01no380_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:04 2005
(438 letters)
>mm_chr1_134897443_134898280
Length = 838
Score = 269 bits (139), Expect = 3e-76
Identities = 142/143 (99%)
Strand = Plus / Minus
Query: 1 ttactggtttgtttcatctgtgtgtatatgatgctcagatgtagtcctgacttttctaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttactggtttgtttcatctgtgtgtatatgatgctcagatgtagtcctgacttttctaac 281
Query: 61 ttccacattgaaccccctgcaaaggctgtgttcactgttggagaatctgaccttgagcat 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttccacattgaaccctctgcaaaggctgtgttcactgttggagaatctgaccttgagcat 221
Query: 121 gaaattgatgttttttttttttt 143
|||||||||||||||||||||||
Sbjct: 220 gaaattgatgttttttttttttt 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
