AAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCATTCATTTCTTGCAGTTCAGTGTTGAAATTTTGTCTTTCGTGAGCCT
GCTTAGGTCTTGTGCATGCTATCAACATGAGTTTACATGCAACTGCCCTA
CTGAGTCTAGAATCAGTTTCTTCACACTCACTCAGTTCTCTGCCTTTTAA
GATCTTTCTGCTGCTTCTTTCAATAGATCCCTCAGCTTTTGGAGGAGAGT
GTGATAGACTTGTCTCATTTATAGCTGAGCACCCTAGACTCACTTATTCT
AGGTATCTTGATCTTTATCTCTGATCTAATTTCCATGTACAGATAGAAGA
GTCTCTGATGATGTTTGAGGAATGCATTAATCAACATGTATAGTGAGAAT
TTTTAAGGAGTCTGTTTAATATAATATCCCATCACCATAACAGGTGTAGG
TACTCCCTAAGGCCCATAATACCCCTCACCACAGATTCTTGGCCCTGATG
ATGGTTATAGATATTGGTTTCATTTTGTGGATCATACTTTAATTCAATCA
GAAGGCAGTTGGTTCCTTCCCTAGCATTTGTACTGTTATTACACCAAAGA
ACATAAATTGCTGTGGAGTTATTGCTCACAGTATTCACAACTGGATAAGG
GTAGTGATTACTTTTCTCCCTGGAGAGTATGAANACAGTTTTCCAGCATA
ATGAATGCTTTTCAATAG

GAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAAGCCCGTACCTAAACATAGATAGCAAA
CTAGTTCTGATCACACTGTGAATGGCTTTCATTTCTTGATAAGGCTTTGA
GTACATAAAGGAGAGGAAGCTTGGATCATGGCAATTAGAAGTTGGAGATA
GGGTTGGAAATGTGAACTTCAAACAATTCTTGAGGCTTTATTAAGACACA
GAGAGAGACAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGGAGTGTGCTGTCAAATATTTTATCTGGTTTCTTTTATTC
TTTTTTCTATTTTTCATTACTATTATTTGCTGTCAACCAGTCCTTCATAA
AATGTGGTTAATTACAATGCAGTTTTTCTAAATTGTGGCTTTTAGAGATT
CCCCTACCCATTTAGTGCCGAGACATCTTGTTCTCCAGTTTCTAATCCAG
AGATTTTTAAAATGTGAATTTCAGTCTGTCAAAAACTCTCATATGCTTAA
TAAGACCCAATTTTGATGACAGTGCAATGGTGAGAGAACAATTAATAAAG
CAGGCAGATCTCTGCTTAGGTTTTACTCTGAGCAAAAATGTAAATATATA
AGCCTAATGACTACCATTTCTTATTTTCACATTAATTTTTTCTATTCATG
AACCACTACAATGTTATTTTGTGGTTGCTGGG

Query= MSMg01no380_i19.g1 MSMg01no380_i19.g1 CHROMAT_FILE:
MSMg01no380_i19.g1 PHD_FILE: MSMg01no380_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:39 2005
         (571 letters)



>mm_chr1_26483978_26484948
          Length = 971

 Score =  973 bits (503), Expect = 0.0
 Identities = 524/531 (98%)
 Strand = Plus / Minus

                                                                       
Query: 41  cacactgtgaatggctttcatttcttgataaggctttgagtacataaaggagaggaagct 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 cacactgtgaatggctttcatttcttgataaggctttgagtacataaaggagaggaagct 912

                                                                       
Query: 101 tggatcatggcaattagaagttggagatagggttggaaatgtgaacttcaaacaattctt 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tggatcatggcaattagaagttggagatagggttggaaatgtgaacttcaaacaattctt 852

                                                                       
Query: 161 gaggctttattaagacacagagagagacagagggagagagagagagagagagagagagag 220
           ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||
Sbjct: 851 gaggctttattaagacacagagacagacagagagagacagagagagagagagagagagag 792

                                                                       
Query: 221 agagagagagagagagagaggagtgtgctgtcaaatattttatctggtttcttttattct 280
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 agagagagagagagagagaggagtgtgctgtcaaatattttatctggtttcttttattct 732

                                                                       
Query: 281 tttttctatttttcattactattatttgctgtcaaccagtccttcataaaatgtggttaa 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tttttctatttttcattactattatttgctgtcaaccagtccttcataaaatgtggttaa 672

                                                                       
Query: 341 ttacaatgcagtttttctaaattgtggcttttagagattcccctacccatttagtgccga 400
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 671 ttacaatgaagtttttctaaattgtggcttttagagattcccctacccatttagtgctga 612

                                                                       
Query: 401 gacatcttgttctccagtttctaatccagagatttttaaaatgtgaatttcagtctgtca 460
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 611 gacatcttgttctccagtttctaatccagagatttttaaaatatgaatttcagtctgtca 552

                                                                       
Query: 461 aaaactctcatatgcttaataagacccaattttgatgacagtgcaatggtgagagaacaa 520
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 551 aaaactctcatatgcttaataagacccaattttgatgacagtgcaatggagagagaacaa 492

                                                              
Query: 521 ttaataaagcaggcagatctctgcttaggttttactctgagcaaaaatgta 571
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttaataaagcaggcagatctctgcttaggttttactctgagcaaaaatgta 441


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 18
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)