XXXXXXXXXXXXXXXXXXXXXXXXXTCCAAAAGGAGTCCGCGGAATCAGT
TATTTCCTTGACAAAAATGCACTCAGATTTCTCCTGCAAGCACTTATTTG
AATTAAATCTGAGCAGTAGTAAATGAAGAGGCTAGACAGTTTATGGACTT
TATTTTAGTCTCCCTGACTTCAGTACCGCGCTCTTGGGGACATGTTGATC
TGGCTGCCTGCTAGCTTTAGCAGATGTTTTTGCCTAGGGACAAAAGCCAT
CTTCTGCTCTTTGAGCACTTTGTGCTGGAGTTGAGCAGTCCCTCTCTGAG
TGGAGATACTTCTGCTGTGTGGCCTGCTGGTGAGCTAGGGTGCAGGGGTG
GGTGGCATGGGACAAGAACAGAGATCATACTTCAAAGGTCCCTTTTTATG
TCTACACAGGCAGATCATTGCCTTAGTGGACAGGAAAACTAATTCTATCA
TTCTAATTCTCAGGAATCCAGAANAAGGACCAAAACATCCCATAAGAGCC
ACATGGGCCATCTCCACTGCTCTTTCTTCAGTCTCCCCACCAGATCCTTA
CTGATGGTCTCCAGAGAGCCTTGTAACACCATATACACACACCANTGTGT
GTGTGTGTGTGGCCCCTCAAACCCTCACTTTTTCTTTTTTTCTTTCTTCC
CCCCCCTCCTTGTCTCCTCATTTTTTCTCCCTCCTCCCCCCTTCCCTCCT
TCACTTTCCTCCCTCTTTTTTTTCCCCTTCCTTTCTTCTCCTCTTCTCTA
TCTACTCCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTGCTTCTTCAGAACAGACTCAGGACAGACAAAA
TCATCTTGAGTGAAACCAGTGAGGCCAGAGGCAACATGGCACCTGACTGC
AAGCCATATTACAGAGCCGTGCTAGCAGAAATGGCATGGCCATAGAGCAA
GGGACCCATGGGACTGAACGGAGAGCCCAAAAGTAAGCCCACAAACCTAG
AACCCGCTCCTTCTTGACAAACGTGCCCAAACCATAAAGGCTGTGTGACT
CCCTCTTCAATTTAGTGTGCAGGGAAGGCAGACAGCCACATGCAAGAGAA
GGAAACCGAACCTTTTCACGACGGACGGATCTCAGCTCACGATGGACCAA
AGACCAAATGCAAGATCAGGCTGGGTACATGCATGGGAACATGTCAGTAA
GGGCAATGGAGCATCATAGAAGCTGGAATAAGCAATGGCTTTATGTGATT
ATAGAAGGGAGGGGATCAGAACCGAAGACAAACAATTACACTGAGGTTCT
GTACAGCACACAAAACAGCAGAGGAAAAGACAATCTACAGAACTAGAGAA
CTGTCTGCCAACCATCCTCCCAGTGAAGGAGTCATATCCACCATACATAG
GATATTTATAAAAGGTAAGGCATCTTAAAAGCTAGAATCTGATTAACAAA
TGAACAACTGTTTCCGAACAGGCCCCAATACATGAGGGCTCATCCCTACC
ATTTGGCCCCCAG

Query= MSMg01no380_l12.b1 MSMg01no380_l12.b1 CHROMAT_FILE:
MSMg01no380_l12.b1 PHD_FILE: MSMg01no380_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:52 2005
         (239 letters)



>mm_chr1_181077586_181078224
          Length = 639

 Score =  441 bits (228), Expect = e-128
 Identities = 236/239 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctgtgtggcctgctggtgagctagggtgcaggggtgggtggcatgggacaagaacagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gctgtgtggcctgctggtgagctagggtgcaggggtgggtggcatgggacaagaacagag 380

                                                                       
Query: 61  atcatacttcaaaggtccctttttatgtctacacaggcagatcattgccttagtggacag 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atcatgcttcaaaggtccctttttatgtctacacaggcagatcattgccttagtggacag 320

                                                                       
Query: 121 gaaaactaattctatcattctaattctcaggaatccagaanaaggaccaaaacatcccat 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 319 gaaaactaattctatcattctaattctcaggaatccagaaaaaggaccaaaacatcccaa 260

                                                                      
Query: 181 aagagccacatgggccatctccactgctctttcttcagtctccccaccagatccttact 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagagccacatgggccatctccactgctctttcttcagtctccccaccagatccttact 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no380_l12.g1 MSMg01no380_l12.g1 CHROMAT_FILE:
MSMg01no380_l12.g1 PHD_FILE: MSMg01no380_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:52 2005
         (509 letters)



>mm_chr1_180885422_180886330
          Length = 909

 Score =  899 bits (465), Expect = 0.0
 Identities = 498/509 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcttcttcagaacagactcaggacagacaaaatcatcttgagtgaaaccagtgaggcca 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttcttcacaacagactcaggacagacaaaatcatcttgagtgaaaccagtgaggcca 260

                                                                       
Query: 61  gaggcaacatggcacctgactgcaagccatattacagagccgtgctagcagaaatggcat 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gaggcaacatggcacctgactgcaagccatattacagagccgtgctagcagaaacggcat 320

                                                                       
Query: 121 ggccatagagcaagggacccatgggactgaacggagagcccaaaagtaagcccacaaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccatagagcaagggacccatgggactgaacggagagcccaaaagtaagcccacaaacc 380

                                                                       
Query: 181 tagaacccgctccttcttgacaaacgtgcccaaaccataaaggctgtgtgactccctctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaacccgctccttcttgacaaacgtgcccaaaccataaaggctgtgtgactccctctt 440

                                                                       
Query: 241 caatttagtgtgcagggaaggcagacagccacatgcaagagaaggaaaccgaaccttttc 300
           |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacaaagtgtgcagggaaggcagacagccacatgcaagagaaggaaaccgaaccttttc 500

                                                                       
Query: 301 acgacggacggatctcagctcacgatggaccaaagaccaaatgcaagatcaggctgggta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 501 acgacggacggatctcagctcacgatggaccaaagaccaaatgcaagatcaagctgggaa 560

                                                                       
Query: 361 catgcatgggaacatgtcagtaagggcaatggagcatcatagaagctggaataagcaatg 420
           |||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||||
Sbjct: 561 catgcatgggaacacgtcagtaagggcaatggagtatcatagaagccagaataagcaatg 620

                                                                       
Query: 421 gctttatgtgattatagaagggaggggatcagaaccgaagacaaacaattacactgaggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctttatgtgattatagaagggaggggatcagaaccgaagacaaacaattacactgaggt 680

                                        
Query: 481 tctgtacagcacacaaaacagcagaggaa 509
           |||||||||||||||||||||||||||||
Sbjct: 681 tctgtacagcacacaaaacagcagaggaa 709


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)