Query= MSMg01no381_j21.b1 MSMg01no381_j21.b1 CHROMAT_FILE:
MSMg01no381_j21.b1 PHD_FILE: MSMg01no381_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:05 2005
(394 letters)
>mm_chr1_183063567_183064361
Length = 795
Score = 685 bits (354), Expect = 0.0
Identities = 361/364 (99%), Gaps = 2/364 (0%)
Strand = Plus / Minus
Query: 1 gtctggctaccctggtgtttcttggtgtcattgtccgtgtgtgtttcccccccagccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gtctggctaccctggtgtttcttggtgtcattgtccgtgtgtgtttcccccccagccccc 303
Query: 61 cattgttcctcagtgacagcaagttcttactgtatctacaacgccaattaagctagctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cattgttcctcagtgacagcaagttcttactgtatctacaacgccaattaagctagctaa 243
Query: 121 ctagtctgtctttgtaccccctcttccccctagatttttttttttttttttttgagacag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 242 ctagtctgtctttgtaccccctcttccccctaga--attttttttttttttttgagacag 185
Query: 181 ggttcctctgtatagccctggctgtcctggaactcactctgtagactcagaaatccgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggttcctctgtatagccctggctgtcctggaactcactctgtagactcagaaatccgcct 125
Query: 241 gcctctcaaatatatttgaaacaattagatgtagggatcaacttttccaagtataaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcctctcaaatatatttgaaacaattagatgtagggatcaacttttccaagtataaattt 65
Query: 301 tgtaaaatctaagtcataaattacccttgaaaattttgtgtccaaattaggatgtgctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tgtaaaatctaagtcataaattacccttgaaaattttgtgtccaaattaggatgtgctac 5
Query: 361 aaat 364
||||
Sbjct: 4 aaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 795
Length adjustment: 9
Effective length of query: 385
Effective length of database: 786
Effective search space: 302610
Effective search space used: 302610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_j21.g1 MSMg01no381_j21.g1 CHROMAT_FILE:
MSMg01no381_j21.g1 PHD_FILE: MSMg01no381_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:05 2005
(332 letters)
>mm_chr1_182884143_182884874
Length = 732
Score = 588 bits (304), Expect = e-172
Identities = 325/332 (97%)
Strand = Plus / Plus
Query: 1 tttgtgggtaggaaggcggatcaagttactccttcatttctggggccaaggcagggacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgggtaggaaggcggatcaagttactccttcatttctggggccaaggcagggacag 260
Query: 61 agggaaggagttgtacaattggatggaatgagacagagaatgttcaaaacatggctcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaaggagttgtacaattggatggaatgagacagagaatgttcaaaacatggctcacc 320
Query: 121 tctgtctccgagcccatcctggggttggggaaagggagatacagggtgaaggagggccaa 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtctccaagcccatcctggggttggggaaagggagatacagggtgaaggagggccaa 380
Query: 181 ggcgagctgcatggtattcccaaaggggctttcagcagccatcttgctgtggaagcaagt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ggcgagctgcatggtattcccaaaggggctttcagtagccatcttgctgtggaagcaagt 440
Query: 241 agggattgtgggatttttgtatgcatacgcctcatccatccatcataggacgggagcaca 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggattgtgggaaagttgtatgcatacgcctcatccatccatcataggacgggagcaca 500
Query: 301 gatgtttctaacaacagaacacgggagatggt 332
|||||||||| ||||||||||| |||||||||
Sbjct: 501 gatgtttctagcaacagaacacaggagatggt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
