Query= MSMg01no383_h23.b1 MSMg01no383_h23.b1 CHROMAT_FILE:
MSMg01no383_h23.b1 PHD_FILE: MSMg01no383_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:33 2005
(440 letters)
>mm_chr1_12933453_12934292
Length = 840
Score = 791 bits (409), Expect = 0.0
Identities = 430/437 (98%)
Strand = Plus / Plus
Query: 4 gaattcgtcttccctccctaacttgtagaggctgtgcctacaattcttttgttcacagac 63
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 gaattcgtcttccctccctaacttgtagaggccgtgcctacaattcttttgttcacagac 263
Query: 64 ctttatccatcttcaaagtgaactgtcaggatctcctctttaatcaacagaggtcctgca 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 264 ctttatccatcttcaaagtgaactgccaggatctcctctttaatcaacagaggccctgca 323
Query: 124 tctggccacctccctcccctttcaccaaagataccctccccctacaaaatccttaatgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctggccacctccctcccctttcaccaaagataccctccccctacaaaatccttaatgtg 383
Query: 184 accacccctcttcaaagtcccctcaccacataaggtcccatattcataagctctgggaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accacccctcttcaaagtcccctcaccacataaggtcccatattcataagctctgggaat 443
Query: 244 acgaaaatggcagtttgtaggggaaattattctccctatcatctattgcaggtaatgcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acgaaaatggcagtttgtaggggaaattattctccctatcatctattgcaggtaatgcct 503
Query: 304 agctagctacctttcccctttttgctagggacattgtaaatgcagagtagtcgtgactga 363
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 agctagctaccttccccctttttgctggggacattgtaaatgcagagtagtcgtgactga 563
Query: 364 cgatctctagtaagaagtaaaatagaaaatgtggaaaacactcaccagtttccgatgaaa 423
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 564 cgatctctagtaagaagtgaaatagaaaatgcggaaaacactcaccagtttccgatgaaa 623
Query: 424 cgagggtcactctggtc 440
|||||||||||||||||
Sbjct: 624 cgagggtcactctggtc 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_h23.g1 MSMg01no383_h23.g1 CHROMAT_FILE:
MSMg01no383_h23.g1 PHD_FILE: MSMg01no383_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:34 2005
(439 letters)
>mm_chr1_13101256_13102093
Length = 838
Score = 833 bits (431), Expect = 0.0
Identities = 437/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 1 tttgctgccctgactagggctgagtaattgaccctaaagggaatgcgcctgttgttttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tttgctgccctgactagggctgagtaattgaccctaaagggaatgcgcctgttgttttag 579
Query: 61 gactgttttaattcatgttaattaactcagaacaatggtcttttgagaaggtcctggcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gactgttttaattcatgttaattaactcagaacaatggtcttttgagaaggtcctggcct 519
Query: 121 cctcatgtaattaagcagccttccttgactgctagctccaaatatattgcttaaaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cctcatgtaattaagcagccttccttgactgctagctccaaatatattgcttaaaacatt 459
Query: 181 ttcttactatttaggggtttaaacattatttttgattcaaacagtatgacaactcaatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttcttactatttaggggtttaaacattatttttgattcaaacagtatgacaactcaatga 399
Query: 241 tcttttttcttttcactcactggataaatcaaatgaggtgttttgttttttgaacttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcttttttcttttcactcactggataaatcaaatgaggtgttttgttttttgaacttgat 339
Query: 301 tagcaaaaaacagaaaggagtttattgttgtgtcatttctaattctcactgtgcatgcat 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 tagcaaaaaacagaaaggagtttattg-tgtgtcatttctaattctcactgtgcatgcat 280
Query: 361 gccgaatatactggattcttttctaatgcatcccacactaactgagtattttaagagctg 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 279 gccgaatatactggattcttttctaatgcatcccacactaactgggtattttaagagctg 220
Query: 421 tttccttcagtttggctcc 439
|||||||||||||||||||
Sbjct: 219 tttccttcagtttggctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
